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Catsper1 cation channel, sperm associated 1 [ Mus musculus (house mouse) ]

Gene ID: 225865, updated on 8-May-2016
Official Symbol
Catsper1provided by MGI
Official Full Name
cation channel, sperm associated 1provided by MGI
Primary source
MGI:MGI:2179947
See related
Ensembl:ENSMUSG00000038498
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
KSper; Catsper
Orthologs
Location:
19; 19 A
Exon count:
12
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (5335602..5344281)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (5335741..5344153)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene galactose-3-O-sulfotransferase 3 Neighboring gene predicted gene, 42064 Neighboring gene RNA polymerase II associated protein 2 pseudogene Neighboring gene cystatin E/M Neighboring gene barrier to autointegration factor 1 Neighboring gene eukaryotic translation initiation factor 1A domain containing

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 
calcium channel activity IEA
Inferred from Electronic Annotation
more info
 
ion channel activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
voltage-gated calcium channel activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
voltage-gated ion channel activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
calcium ion transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
fusion of sperm to egg plasma membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
ion transport IEA
Inferred from Electronic Annotation
more info
 
membrane depolarization during action potential IBA
Inferred from Biological aspect of Ancestor
more info
 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
regulation of calcium ion transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of cilium beat frequency involved in ciliary motility IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
sperm motility IMP
Inferred from Mutant Phenotype
more info
PubMed 
spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
CatSper complex IDA
Inferred from Direct Assay
more info
PubMed 
cell projection IEA
Inferred from Electronic Annotation
more info
 
cilium IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
motile cilium IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
cation channel sperm-associated protein 1
Names
cation channel of sperm 1
sperm calcium channel 1
sperm ion channel
sperm protein CATSPER1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_139301.2NP_647462.1  cation channel sperm-associated protein 1

    See identical proteins and their annotated locations for NP_647462.1

    Status: PROVISIONAL

    Source sequence(s)
    AC122861
    Consensus CDS
    CCDS29456.1
    UniProtKB/Swiss-Prot
    Q91ZR5
    Related
    ENSMUSP00000045430, ENSMUST00000043380
    Conserved Domains (1) summary
    pfam00520
    Location:386576
    Ion_trans; Ion transport protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

    Range
    5335602..5344281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006531708.1XP_006531771.1  

    Conserved Domains (2) summary
    PHA03420
    Location:3493
    PHA03420; E4 protein; Provisional
    pfam00520
    Location:307497
    Ion_trans; Ion transport protein

Alternate Mm_Celera

Genomic

  1. AC_000041.1 Alternate Mm_Celera

    Range
    5207633..5216045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)