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FAM200A family with sequence similarity 200 member A [ Homo sapiens (human) ]

Gene ID: 221786, updated on 26-May-2016
Official Symbol
FAM200Aprovided by HGNC
Official Full Name
family with sequence similarity 200 member Aprovided by HGNC
Primary source
HGNC:HGNC:25401
See related
Ensembl:ENSG00000221909 HPRD:13221; Vega:OTTHUMG00000156723
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C7orf38
Summary
This gene encodes a protein of unknown function. The protein is weakly similar to transposase-like proteins in human and mouse. [provided by RefSeq, Jul 2008]
Orthologs
Location:
7q22.1
Exon count:
6
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 7 NC_000007.14 (99546300..99559395, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (99143923..99156115, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene zinc finger with KRAB and SCAN domains 5 Neighboring gene zinc finger protein 3 pseudogene Neighboring gene uncharacterized LOC105375422 Neighboring gene zinc finger protein 655 Neighboring gene transmembrane protein 225-like Neighboring gene zinc finger and SCAN domain containing 25 Neighboring gene ADP ribosylation factor 6 pseudogene

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ36794, DKFZp727G131

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
protein FAM200A
Names
family with sequence similarity 200, member A

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145111.3NP_659802.1  protein FAM200A

    See identical proteins and their annotated locations for NP_659802.1

    Status: VALIDATED

    Source sequence(s)
    AK290724, BC040214
    Consensus CDS
    CCDS5668.1
    UniProtKB/Swiss-Prot
    Q8TCP9
    Related
    ENSP00000411372, OTTHUMP00000210467, ENST00000449309, OTTHUMT00000345467

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p2 Primary Assembly

    Range
    99546300..99559395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005250199.2XP_005250256.1  

    See identical proteins and their annotated locations for XP_005250256.1

    UniProtKB/Swiss-Prot
    Q8TCP9
    Related
    ENSP00000386191, OTTHUMP00000210468, ENST00000408938, OTTHUMT00000345468
  2. XM_011515911.1XP_011514213.1  

    See identical proteins and their annotated locations for XP_011514213.1

    UniProtKB/Swiss-Prot
    Q8TCP9
  3. XM_011515913.1XP_011514215.1  

    See identical proteins and their annotated locations for XP_011514215.1

    UniProtKB/Swiss-Prot
    Q8TCP9
  4. XM_011515912.1XP_011514214.1  

    See identical proteins and their annotated locations for XP_011514214.1

    UniProtKB/Swiss-Prot
    Q8TCP9

Alternate CHM1_1.1

Genomic

  1. NC_018918.2 Alternate CHM1_1.1

    Range
    99074024..99079838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)