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Trpc2 transient receptor potential cation channel, subfamily C, member 2 [ Mus musculus (house mouse) ]

Gene ID: 22064, updated on 30-Jun-2014
Official Symbol
Trpc2provided by MGI
Official Full Name
transient receptor potential cation channel, subfamily C, member 2provided by MGI
Primary source
MGI:109527
See related
Ensembl:ENSMUSG00000070425; Vega:OTTMUSG00000022733
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
trp2; Trrp2; mTrp2; TRPC2a; TRPC2b; smTRPC2; AI115608; 3010009O07Rik
See Trpc2 in Epigenomics, MapViewer
Location:
7 F1; 7 54.71 cM
Exon count :
13
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 7 NC_000073.6 (102083116..102096864)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene interleukin 18 binding protein Neighboring gene ring finger protein 121 Neighboring gene Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough Neighboring gene Xrcc1 N-terminal domain containing 1 Neighboring gene ADP-ribosyltransferase 5 Neighboring gene ADP-ribosyltransferase 1 Neighboring gene cholinergic receptor, nicotinic, alpha polypeptide 10

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
Products Interactant Other Gene Complex Source Pubs Description

Markers

Readthrough Xntrpc

Readthrough gene: Xntrpc, Included gene: Xndc1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium channel activity IEA
Inferred from Electronic Annotation
more info
 
calmodulin binding IDA
Inferred from Direct Assay
more info
PubMed 
damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 
diacylglycerol binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
inositol 1,4,5 trisphosphate binding IDA
Inferred from Direct Assay
more info
PubMed 
ion channel activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
store-operated calcium channel activity IDA
Inferred from Direct Assay
more info
PubMed 
NOT store-operated calcium channel activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acrosome reaction IMP
Inferred from Mutant Phenotype
more info
PubMed 
calcium ion transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
calcium ion transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
female courtship behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
inter-male aggressive behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
ion transport IEA
Inferred from Electronic Annotation
more info
 
mating behavior, sex discrimination IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of male mating behavior IGI
Inferred from Genetic Interaction
more info
 
positive regulation of cytosolic calcium ion concentration IPI
Inferred from Physical Interaction
more info
PubMed 
regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
 
response to pheromone IMP
Inferred from Mutant Phenotype
more info
PubMed 
single strand break repair IEA
Inferred from Electronic Annotation
more info
 
territorial aggressive behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
dendrite membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
endomembrane system IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum membrane IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
microvillus ISO
Inferred from Sequence Orthology
more info
 
nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
short transient receptor potential channel 2
Names
short transient receptor potential channel 2
transient receptor potential 2-like protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109897.2NP_001103367.1  short transient receptor potential channel 2

    Status: VALIDATED

    Source sequence(s)
    AC132297, AC150275
    Consensus CDS
    CCDS52333.1
    UniProtKB/Swiss-Prot
    Q9R244
    Related
    ENSMUSP00000102556, ENSMUST00000106943
    Conserved Domains (3) summary
    TIGR00870
    Location:23761
    Blast Score: 1120
    trp; transient-receptor-potential calcium channel protein
    cd00204
    Location:63172
    Blast Score: 107
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam08344
    Location:183245
    Blast Score: 284
    TRP_2; Transient receptor ion channel II

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000073.6 

    Range
    102083116..102096864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000029.1 

    Range
    102451426..102463923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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