These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_007980.1 RefSeqGene
- Range
- 4958..108126
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001271696.1 → NP_001258625.1 ATP-binding cassette sub-family B member 7, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AF133659, BP228998, CN411218
- UniProtKB/Swiss-Prot
-
O75027
- Conserved Domains (3) summary
-
- COG5265
Location:210 – 705
Blast Score: 1515
- ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
- pfam00664
Location:140 – 411
Blast Score: 265
- ABC_membrane; ABC transporter transmembrane region
- cd03253
Location:472 – 708
Blast Score: 1057
- ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
-
NM_001271697.1 → NP_001258626.1 ATP-binding cassette sub-family B member 7, mitochondrial isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 5' coding region and lacks an alternate in-frame exon, compared to variant 1. This results in a shorter protein (isoform 3), compared to isoform 1.
- Source sequence(s)
-
AL359545, BP228998, BX537833, CN411218
- UniProtKB/TrEMBL
-
G3XAC4
- UniProtKB/TrEMBL
-
Q7Z3K5
- Conserved Domains (3) summary
-
- COG5265
Location:170 – 665
Blast Score: 1517
- ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
- cl00549
Location:111 – 371
Blast Score: 257
- ABC_membrane; ABC transporter transmembrane region
- cd03253
Location:432 – 668
Blast Score: 1059
- ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
-
NM_001271698.1 → NP_001258627.1 ATP-binding cassette sub-family B member 7, mitochondrial isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 4), compared to isoform 1.
- Source sequence(s)
-
AK294657, BC006323, BP228998, CN411218
- UniProtKB/TrEMBL
-
B4DGL8
- UniProtKB/Swiss-Prot
-
O75027
- Conserved Domains (3) summary
-
- COG5265
Location:184 – 679
Blast Score: 1514
- ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
- pfam00664
Location:114 – 385
Blast Score: 264
- ABC_membrane; ABC transporter transmembrane region
- cd03253
Location:446 – 682
Blast Score: 1057
- ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
-
NM_001271699.1 → NP_001258628.1 ATP-binding cassette sub-family B member 7, mitochondrial isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame internal exon, compared to variant 1. This results in a shorter protein (isoform 5), compared to isoform 1.
- Source sequence(s)
-
AK307414, BP228998, CN411218, U66679
- Conserved Domains (3) summary
-
- COG5265
Location:171 – 666
Blast Score: 1517
- ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
- cl00549
Location:112 – 372
Blast Score: 257
- ABC_membrane; ABC transporter transmembrane region
- cd03253
Location:433 – 669
Blast Score: 1059
- ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
-
NM_004299.4 → NP_004290.2 ATP-binding cassette sub-family B member 7, mitochondrial isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
BC006323, BP228998, CN411218
- Consensus CDS
-
CCDS14428.1
- UniProtKB/Swiss-Prot
-
O75027
- Related
- ENSP00000253577, OTTHUMP00000023578, ENST00000253577, OTTHUMT00000057273
- Conserved Domains (3) summary
-
- COG5265
Location:211 – 706
Blast Score: 1516
- ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
- cd03253
Location:473 – 709
Blast Score: 969
- ABCC_ATM1_transporter; ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to ...
- pfam00664
Location:141 – 412
Blast Score: 265
- ABC_membrane; ABC transporter transmembrane region
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p10 Primary Assembly
Genomic
-
NC_000023.10 Reference GRCh37.p10 Primary Assembly
- Range
- 74273105..74376132, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000155.1 Alternate HuRef
- Range
- 67906657..68009965, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CHM1_1.0
Genomic
-
NC_018934.1 Alternate CHM1_1.0
- Range
- 74281193..74384225, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)