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Ckap4 cytoskeleton-associated protein 4 [ Mus musculus (house mouse) ]

Gene ID: 216197, updated on 8-May-2016
Official Symbol
Ckap4provided by MGI
Official Full Name
cytoskeleton-associated protein 4provided by MGI
Primary source
MGI:MGI:2444926
See related
Ensembl:ENSMUSG00000046841
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
P63; CLIMP-63; 5630400A09Rik
Orthologs
Location:
10; 10 C1
Exon count:
2
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 10 NC_000076.6 (84526305..84533888, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (83989050..83996633, complement)

Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930463O16 gene Neighboring gene predicted gene, 34405 Neighboring gene transcription factor E3 pseudogene Neighboring gene pluripotency associated transcript 7 Neighboring gene predicted gene, 34515

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cell surface ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
lipid particle ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
cytoskeleton-associated protein 4
Names
63 kDa membrane protein
63-kDa cytoskeleton-linking membrane protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175451.1NP_780660.1  cytoskeleton-associated protein 4

    See identical proteins and their annotated locations for NP_780660.1

    Status: VALIDATED

    Source sequence(s)
    AK030708, BB033173, BB620334, BE647088
    Consensus CDS
    CCDS24080.1
    UniProtKB/Swiss-Prot
    Q8BMK4
    Related
    ENSMUSP00000050336, ENSMUST00000053871
    Conserved Domains (2) summary
    COG4649
    Location:229334
    COG4649; Uncharacterized protein [Function unknown]
    pfam04100
    Location:173398
    Vps53_N; Vps53-like, N-terminal

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000076.6 Reference GRCm38.p3 C57BL/6J

    Range
    84526305..84533888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000032.1 Alternate Mm_Celera

    Range
    86505218..86512538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)