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Cilp cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [ Mus musculus (house mouse) ]

Gene ID: 214425, updated on 28-May-2016
Official Symbol
Cilpprovided by MGI
Official Full Name
cartilage intermediate layer protein, nucleotide pyrophosphohydrolaseprovided by MGI
Primary source
MGI:MGI:2444507
See related
Ensembl:ENSMUSG00000042254 Vega:OTTMUSG00000016695
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9830114D16; C130036G17Rik
Orthologs
Location:
9; 9 C
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 9 NC_000075.6 (65265180..65280605)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (65112987..65128412)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 40527 Neighboring gene RNA, U5G small nuclear Neighboring gene poly (ADP-ribose) polymerase family, member 16 Neighboring gene predicted gene, 36538 Neighboring gene caseinolytic mitochondrial matrix peptidase chaperone subunit Neighboring gene predicted gene, 39363 Neighboring gene protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform pseudogene

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
negative regulation of insulin-like growth factor receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
extracellular matrix ISO
Inferred from Sequence Orthology
more info
 
extracellular region IEA
Inferred from Electronic Annotation
more info
 
extracellular space ISO
Inferred from Sequence Orthology
more info
 
proteinaceous extracellular matrix IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
cartilage intermediate layer protein 1
Names
CILP-1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173385.2NP_775561.1  cartilage intermediate layer protein 1 precursor

    See identical proteins and their annotated locations for NP_775561.1

    Status: PROVISIONAL

    Source sequence(s)
    AK081544
    Consensus CDS
    CCDS23287.1
    UniProtKB/Swiss-Prot
    Q66K08
    UniProtKB/TrEMBL
    A0A0R4J0F8
    Related
    ENSMUSP00000036631, OTTMUSP00000018063, ENSMUST00000048762, OTTMUST00000040435
    Conserved Domains (5) summary
    cd00096
    Location:326390
    Ig; Immunoglobulin domain
    smart00408
    Location:323383
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:152200
    TSP1; Thrombospondin type 1 repeats
    pfam13330
    Location:55139
    Mucin2_WxxW; Mucin-2 protein WxxW repeating region
    pfam13715
    Location:492580
    DUF4480; Domain of unknown function (DUF4480)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p3 C57BL/6J

    Range
    65265180..65280605
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000031.1 Alternate Mm_Celera

    Range
    62495518..62510943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)