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Surf6 surfeit gene 6 [ Mus musculus (house mouse) ]

Gene ID: 20935, updated on 28-May-2016
Official Symbol
Surf6provided by MGI
Official Full Name
surfeit gene 6provided by MGI
Primary source
MGI:MGI:98447
See related
Ensembl:ENSMUSG00000036160 Vega:OTTMUSG00000011581
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Surf-6; D2Wsu129e
Orthologs
Location:
2 A3; 2 19.08 cM
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 2 NC_000068.7 (26890772..26902813, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (26746292..26758333, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39774 Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) Neighboring gene mediator complex subunit 22 Neighboring gene ribosomal protein L7A

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
ribosome assembly NAS
Non-traceable Author Statement
more info
PubMed 
ribosome biogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
granular component IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
nucleoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009298.3NP_033324.1  surfeit locus protein 6

    See identical proteins and their annotated locations for NP_033324.1

    Status: PROVISIONAL

    Source sequence(s)
    BC037634
    Consensus CDS
    CCDS15812.1
    UniProtKB/Swiss-Prot
    P70279
    UniProtKB/TrEMBL
    Q3V1X4
    Related
    ENSMUSP00000048457, OTTMUSP00000012334, ENSMUST00000047632, OTTMUST00000027066
    Conserved Domains (1) summary
    pfam04935
    Location:163345
    SURF6; Surfeit locus protein 6

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p3 C57BL/6J

    Range
    26890772..26902813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000024.1 Alternate Mm_Celera

    Range
    26600515..26612557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)