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Sntb2 syntrophin, basic 2 [ Mus musculus (house mouse) ]

Gene ID: 20650, updated on 28-May-2016
Official Symbol
Sntb2provided by MGI
Official Full Name
syntrophin, basic 2provided by MGI
Primary source
MGI:MGI:101771
See related
Ensembl:ENSMUSG00000041308
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Snt2
Orthologs
Location:
8 D3; 8 53.38 cM
Exon count:
7
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 8 NC_000074.6 (106935750..107014192)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (109459650..109538092)

Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene cirrhosis, autosomal recessive 1A (human) Neighboring gene ribosomal protein L10, pseudogene 2 Neighboring gene predicted gene 16208 Neighboring gene vacuolar protein sorting 4A Neighboring gene translocase of inner mitochondrial membrane 23 homolog pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
actin binding IEA
Inferred from Electronic Annotation
more info
 
calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural molecule activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell junction IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
focal adhesion ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
microtubule IEA
Inferred from Electronic Annotation
more info
 
protein complex ISO
Inferred from Sequence Orthology
more info
PubMed 
synapse IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
beta-2-syntrophin
Names
59 kDa dystrophin-associated protein A1 basic component 2
SNT3
SNTL
syntrophin-3

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009229.4NP_033255.1  beta-2-syntrophin

    See identical proteins and their annotated locations for NP_033255.1

    Status: PROVISIONAL

    Source sequence(s)
    AC123864, AC123868, AC140328
    Consensus CDS
    CCDS22642.1
    UniProtKB/Swiss-Prot
    Q61235
    UniProtKB/TrEMBL
    Q542S9
    Related
    ENSMUSP00000037324, ENSMUST00000047425
    Conserved Domains (3) summary
    smart00233
    Location:317417
    PH; Pleckstrin homology domain
    cd00992
    Location:93175
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01258
    Location:224281
    PHsplit_syntrophin; Syntrophin Split Pleckstrin homology (PH) domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000074.6 Reference GRCm38.p3 C57BL/6J

    Range
    106935750..107014192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000030.1 Alternate Mm_Celera

    Range
    111162468..111240536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)