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C3orf58 chromosome 3 open reading frame 58 [ Homo sapiens (human) ]

Gene ID: 205428, updated on 8-May-2016
Official Symbol
C3orf58provided by HGNC
Official Full Name
chromosome 3 open reading frame 58provided by HGNC
Primary source
HGNC:HGNC:28490
See related
Ensembl:ENSG00000181744 HPRD:14559; MIM:612200; Vega:OTTHUMG00000159380
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DIA1; HASF; GoPro49
Orthologs
Location:
3q24
Exon count:
4
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 3 NC_000003.12 (143971798..143992368)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (143690640..143711210)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene solute carrier family 9 member A9 Neighboring gene uncharacterized LOC102724120 Neighboring gene ribosomal protein S17 pseudogene 10 Neighboring gene RNA, 5S ribosomal pseudogene 144 Neighboring gene uncharacterized LOC105374139

Products Interactant Other Gene Complex Source Pubs Description

Homology

Clone Names

  • MGC33365

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cardiac muscle cell proliferation IDA
Inferred from Direct Assay
more info
PubMed 
regulation of phosphatidylinositol 3-kinase signaling IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
COPI vesicle coat IDA
Inferred from Direct Assay
more info
PubMed 
Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
deleted in autism protein 1
Names
Golgi Protein of 49 kDa
Golgi protein GoPro49
UPF0672 protein C3orf58
deleted in autism 1
hypoxia and AKT-induced stem cell factor
hypoxia and Akt induced stem cell factor

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134470.1NP_001127942.1  deleted in autism protein 1 isoform b

    See identical proteins and their annotated locations for NP_001127942.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate 5' terminal exon and differs in the 5' UTR and coding region, compared to variant 1. It encodes isoform b, which is shorter and has a distinct N-terminus, compared to isoform a.
    Source sequence(s)
    AK095400, BC037293, BM968874, DC310234, DC310421
    Consensus CDS
    CCDS46929.1
    UniProtKB/Swiss-Prot
    Q8NDZ4
    UniProtKB/TrEMBL
    B3KTD4
    Related
    ENSP00000417382, OTTHUMP00000215116, ENST00000495414, OTTHUMT00000355039
    Conserved Domains (1) summary
    pfam12260
    Location:11196
    PIP49_C; Protein-kinase domain of FAM69
  2. NM_173552.3NP_775823.1  deleted in autism protein 1 isoform a precursor

    See identical proteins and their annotated locations for NP_775823.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
    Source sequence(s)
    AK095400, BC037293, BM968874, DA760601, DB067725
    Consensus CDS
    CCDS3130.1
    UniProtKB/Swiss-Prot
    Q8NDZ4
    UniProtKB/TrEMBL
    B3KTD4
    Related
    ENSP00000320081, OTTHUMP00000215115, ENST00000315691, OTTHUMT00000355038
    Conserved Domains (1) summary
    pfam12260
    Location:206405
    PIP49_C; Protein-kinase domain of FAM69

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p2 Primary Assembly

    Range
    143971798..143992368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011512543.1XP_011510845.1  

Alternate CHM1_1.1

Genomic

  1. NC_018914.2 Alternate CHM1_1.1

    Range
    143654076..143674614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)