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Slc7a7 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 [ Mus musculus (house mouse) ]

Gene ID: 20540, updated on 28-May-2016
Official Symbol
Slc7a7provided by MGI
Official Full Name
solute carrier family 7 (cationic amino acid transporter, y+ system), member 7provided by MGI
Primary source
MGI:MGI:1337120
See related
Ensembl:ENSMUSG00000000958 Vega:OTTMUSG00000053898
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
my+lat1; AI790233
Orthologs
Location:
14; 14 C1
Exon count:
18
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 14 NC_000080.6 (54369442..54417702, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (54989128..55036536, complement)

Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene olfactory receptor 49 Neighboring gene eukaryotic translation initiation factor 4H pseudogene Neighboring gene oxidase assembly 1-like Neighboring gene mitochondrial ribosomal protein L52 Neighboring gene matrix metallopeptidase 14 (membrane-inserted)

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
L-amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
basic amino acid transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
amino acid transport IEA
Inferred from Electronic Annotation
more info
 
regulation of arginine metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
Y+L amino acid transporter 1
Names
solute carrier family 7 member 7
y(+)L-type amino acid transporter 1
y+LAT-1
y+LAT1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001253679.1NP_001240608.1  Y+L amino acid transporter 1

    See identical proteins and their annotated locations for NP_001240608.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon in the 5' UTR, compared to variant 1. Variants 1-3 encode the same protein.
    Source sequence(s)
    AC206013
    Consensus CDS
    CCDS27087.1
    UniProtKB/Swiss-Prot
    Q9Z1K8
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  2. NM_001253680.1NP_001240609.1  Y+L amino acid transporter 1

    See identical proteins and their annotated locations for NP_001240609.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1-3 encode the same protein.
    Source sequence(s)
    AK152637, AV487330, CB953352
    Consensus CDS
    CCDS27087.1
    UniProtKB/Swiss-Prot
    Q9Z1K8
    Related
    ENSMUSP00000000984, OTTMUSP00000071171, ENSMUST00000000984, OTTMUST00000134081
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  3. NM_011405.4NP_035535.2  Y+L amino acid transporter 1

    See identical proteins and their annotated locations for NP_035535.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longest transcript. Variants 1-3 encode the same protein.
    Source sequence(s)
    AK151718, AV487330, BY032471
    Consensus CDS
    CCDS27087.1
    UniProtKB/Swiss-Prot
    Q9Z1K8
    Related
    ENSMUSP00000143743, OTTMUSP00000071172, ENSMUST00000197440, OTTMUST00000134082
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000080.6 Reference GRCm38.p3 C57BL/6J

    Range
    54369442..54417702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006518752.1XP_006518815.1  

    See identical proteins and their annotated locations for XP_006518815.1

    UniProtKB/Swiss-Prot
    Q9Z1K8
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  2. XM_006518746.2XP_006518809.1  

    Conserved Domains (2) summary
    TIGR00911
    Location:44517
    2A0308; L-type amino acid transporter
    cl00456
    Location:100406
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  3. XM_006518751.2XP_006518814.1  

    See identical proteins and their annotated locations for XP_006518814.1

    UniProtKB/Swiss-Prot
    Q9Z1K8
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  4. XM_006518748.2XP_006518811.1  

    See identical proteins and their annotated locations for XP_006518811.1

    UniProtKB/Swiss-Prot
    Q9Z1K8
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  5. XM_006518753.1XP_006518816.1  

    See identical proteins and their annotated locations for XP_006518816.1

    UniProtKB/Swiss-Prot
    Q9Z1K8
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  6. XM_006518754.2XP_006518817.1  

    See identical proteins and their annotated locations for XP_006518817.1

    UniProtKB/Swiss-Prot
    Q9Z1K8
    Related
    ENSMUSP00000143091, OTTMUSP00000071173, ENSMUST00000195970, OTTMUST00000134083
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  7. XM_006518755.2XP_006518818.1  

    See identical proteins and their annotated locations for XP_006518818.1

    UniProtKB/Swiss-Prot
    Q9Z1K8
    Conserved Domains (2) summary
    TIGR00911
    Location:21494
    2A0308; L-type amino acid transporter
    cl00456
    Location:77383
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  8. XM_011245000.1XP_011243302.1  

    Conserved Domains (1) summary
    cl00456
    Location:6158
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Alternate Mm_Celera

Genomic

  1. AC_000036.1 Alternate Mm_Celera

    Range
    52159881..52209773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)