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S100a11 S100 calcium binding protein A11 [ Mus musculus (house mouse) ]

Gene ID: 20195, updated on 28-May-2016
Official Symbol
S100a11provided by MGI
Official Full Name
S100 calcium binding protein A11provided by MGI
Primary source
MGI:MGI:1338798
See related
Ensembl:ENSMUSG00000027907 Vega:OTTMUSG00000022126
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
cal; EMAPI; Emap1; S100c; S100a14
Orthologs
Location:
3; 3 E-F
Exon count:
3
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (93520496..93526288)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (93324418..93330210)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene trichohyalin Neighboring gene trichohyalin-like 1 Neighboring gene predicted gene, 29950 Neighboring gene S100 calcium binding protein A10 (calpactin)

Related articles in PubMed

Products Interactant Other Gene Complex Source Pubs Description

Markers

Clone Names

  • MGC107585

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
calcium-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of cell proliferation IEA
Inferred from Electronic Annotation
more info
 
NOT spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
protein S100-A11
Names
EMAP
S100 calcium binding protein A11 (calgizzarin)
S100 calcium binding protein A11 (calizzarin)
S100 calcium binding protein A14
S100 calcium-binding protein A11
calgizzarin
calizzarin
endothelial monocyte activating polypeptide 1
endothelial monocyte-activating polypeptide
protein S100-C

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016740.3NP_058020.1  protein S100-A11

    See identical proteins and their annotated locations for NP_058020.1

    Status: VALIDATED

    Source sequence(s)
    AA207524, AK164352
    Consensus CDS
    CCDS38525.1
    UniProtKB/Swiss-Prot
    P50543
    Related
    ENSMUSP00000029515, OTTMUSP00000024913, ENSMUST00000029515, OTTMUST00000052513
    Conserved Domains (2) summary
    cd05023
    Location:290
    S-100A11; S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 ...
    pfam13499
    Location:2279
    EF-hand_7; EF-hand domain pair

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

    Range
    93520496..93526288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000025.1 Alternate Mm_Celera

    Range
    93567964..93573773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)