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S100a10 S100 calcium binding protein A10 (calpactin) [ Mus musculus (house mouse) ]

Gene ID: 20194, updated on 8-May-2016
Official Symbol
S100a10provided by MGI
Official Full Name
S100 calcium binding protein A10 (calpactin)provided by MGI
Primary source
MGI:MGI:1339468
See related
Ensembl:ENSMUSG00000041959 Vega:OTTMUSG00000022124
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
42C; p10; p11; CAL12; CLP11; Cal1l; AA409961; AL024248
Orthologs
Location:
3 40.51 cM; 3 F1-F2
Exon count:
3
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (93555117..93564645)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (93359039..93368567)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein A11 Neighboring gene predicted gene, 29950 Neighboring gene predicted gene, 40093 Neighboring gene chymotrypsin C (caldecrin) pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
ion channel binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cellular response to acid chemical IDA
Inferred from Direct Assay
more info
PubMed 
establishment of protein localization to plasma membrane ISO
Inferred from Sequence Orthology
more info
 
membrane budding ISO
Inferred from Sequence Orthology
more info
 
membrane raft assembly ISO
Inferred from Sequence Orthology
more info
 
positive regulation of GTPase activity ISO
Inferred from Sequence Orthology
more info
 
positive regulation of binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of focal adhesion assembly ISO
Inferred from Sequence Orthology
more info
 
positive regulation of stress fiber assembly ISO
Inferred from Sequence Orthology
more info
 
positive regulation of substrate adhesion-dependent cell spreading ISO
Inferred from Sequence Orthology
more info
 
protein heterotetramerization ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
extrinsic component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with membrane raft ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
protein S100-A10
Names
S100 calcium binding protein A10 (calgizzarin)
S100 calcium-binding protein A10
calcium binding protein A11 (calgizzarin)
calpactin I light chain
calpactin-1 light chain
cellular ligand of annexin II

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009112.2NP_033138.1  protein S100-A10

    See identical proteins and their annotated locations for NP_033138.1

    Status: VALIDATED

    Source sequence(s)
    AK161647, BU559648, D18288
    Consensus CDS
    CCDS38526.1
    UniProtKB/Swiss-Prot
    P08207
    UniProtKB/TrEMBL
    Q3TC45
    Related
    ENSMUSP00000036949, OTTMUSP00000024909, ENSMUST00000045756, OTTMUST00000052509
    Conserved Domains (1) summary
    cl08302
    Location:393
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

    Range
    93555117..93564645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000025.1 Alternate Mm_Celera

    Range
    93527294..93536975 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)