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CC2D1B coiled-coil and C2 domain containing 1B [ Homo sapiens (human) ]

Gene ID: 200014, updated on 26-May-2016
Official Symbol
CC2D1Bprovided by HGNC
Official Full Name
coiled-coil and C2 domain containing 1Bprovided by HGNC
Primary source
HGNC:HGNC:29386
See related
Ensembl:ENSG00000154222 HPRD:12393; Vega:OTTHUMG00000008102
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
1p32.3
Exon count:
26
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 1 NC_000001.11 (52350593..52366205, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (52816265..52831877, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene zinc finger FYVE-type containing 9 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19 pseudogene 7 Neighboring gene anaphase promoting complex subunit 10 pseudogene 1 Neighboring gene phospholipase A2 group XIIA pseudogene 1 Neighboring gene origin recognition complex subunit 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • KIAA1836

Gene Ontology Provided by GOA

Process Evidence Code Pubs
negative regulation of transcription from RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
coiled-coil and C2 domain-containing protein 1B
Names
FRE under dual repression-binding protein 2
five prime repressor element under dual repression-binding protein 2
freud-2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032449.2NP_115825.1  coiled-coil and C2 domain-containing protein 1B

    See identical proteins and their annotated locations for NP_115825.1

    Status: VALIDATED

    Source sequence(s)
    AB058739, AL513218, BM975102, BQ073406, DB458797
    Consensus CDS
    CCDS30714.1
    UniProtKB/Swiss-Prot
    Q5T0F9
    Related
    ENSP00000360642, OTTHUMP00000009793, ENST00000371586, OTTHUMT00000022189
    Conserved Domains (2) summary
    smart00685
    Location:537594
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
    cd08690
    Location:696853
    C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p2 Primary Assembly

    Range
    52350593..52366205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005270591.1XP_005270648.1  

    See identical proteins and their annotated locations for XP_005270648.1

    UniProtKB/Swiss-Prot
    Q5T0F9
    Related
    ENSP00000284376, OTTHUMP00000009795, ENST00000284376, OTTHUMT00000022191
    Conserved Domains (2) summary
    smart00685
    Location:531588
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
    cd08690
    Location:690847
    C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)
  2. XM_006710423.1XP_006710486.1  

    Conserved Domains (2) summary
    smart00685
    Location:385439
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
    cd08690
    Location:654811
    C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)
  3. XM_005270590.1XP_005270647.1  

    See identical proteins and their annotated locations for XP_005270647.1

    UniProtKB/Swiss-Prot
    Q5T0F9
    Conserved Domains (2) summary
    smart00685
    Location:537594
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
    cd08690
    Location:696853
    C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)
  4. XM_005270593.1XP_005270650.1  

    Related
    ENSP00000402440, OTTHUMP00000009796, ENST00000450942, OTTHUMT00000022192
    Conserved Domains (2) summary
    smart00685
    Location:228285
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
    cd08690
    Location:387544
    C2_Freud-1; C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)
  5. XM_006710422.2XP_006710485.1  

    Conserved Domains (2) summary
    smart00685
    Location:537594
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241
    cl14603
    Location:696822
    C2; C2 domain
  6. XM_011540930.1XP_011539232.1  

    Conserved Domains (1) summary
    smart00685
    Location:385439
    DM14; Repeats in fly CG4713, worm Y37H9A.3 and human FLJ20241

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 Alternate CHM1_1.1

    Range
    52933642..52949254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)