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Rad23b RAD23 homolog B, nucleotide excision repair protein [ Mus musculus (house mouse) ]

Gene ID: 19359, updated on 28-May-2016
Official Symbol
Rad23bprovided by MGI
Official Full Name
RAD23 homolog B, nucleotide excision repair proteinprovided by MGI
Primary source
MGI:MGI:105128
See related
Ensembl:ENSMUSG00000028426 Vega:OTTMUSG00000007227
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
p58; HR23B; mHR23B; AV001138; 0610007D13Rik
Orthologs
Location:
4; 4 B3
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 4 NC_000070.6 (55350042..55392237)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (55362914..55405109)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene predicted gene 12508 Neighboring gene predicted gene, 42290 Neighboring gene predicted gene, 34290 Neighboring gene predicted gene 12505

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 
polyubiquitin binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
DNA repair IEA
Inferred from Electronic Annotation
more info
 
cellular response to DNA damage stimulus IDA
Inferred from Direct Assay
more info
PubMed 
nucleotide-excision repair ISO
Inferred from Sequence Orthology
more info
 
nucleotide-excision repair, DNA damage recognition ISO
Inferred from Sequence Orthology
more info
 
proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
regulation of proteasomal ubiquitin-dependent protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
XPC complex ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
proteasome complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
UV excision repair protein RAD23 homolog B
Names
RAD23b homolog
XP-C repair-complementing complex 58 kDa protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009011.4NP_033037.2  UV excision repair protein RAD23 homolog B

    See identical proteins and their annotated locations for NP_033037.2

    Status: VALIDATED

    Source sequence(s)
    AK142280, AK150089, BE989853, BY140385
    Consensus CDS
    CCDS18194.1
    UniProtKB/Swiss-Prot
    P54728
    UniProtKB/TrEMBL
    Q3UQN3
    Related
    ENSMUSP00000030134, OTTMUSP00000007676, ENSMUST00000030134, OTTMUST00000016670
    Conserved Domains (5) summary
    cd01805
    Location:178
    RAD23_N; Ubiquitin-like domain of RAD23
    pfam09280
    Location:276334
    XPC-binding; XPC-binding domain
    cd14377
    Location:189228
    UBA1_Rad23; UBA1 domain of Rad23 proteins found in metazoa
    cd14428
    Location:372416
    UBA2_HR23B; UBA2 domain of UV excision repair protein RAD23 homolog B (HR23B) found in vertebrates
    TIGR00601
    Location:1414
    rad23; UV excision repair protein Rad23

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p3 C57BL/6J

    Range
    55350042..55392237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000026.1 Alternate Mm_Celera

    Range
    55261308..55305783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)