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Ptcra pre T cell antigen receptor alpha [ Mus musculus (house mouse) ]

Gene ID: 19208, updated on 28-May-2016
Official Symbol
Ptcraprovided by MGI
Official Full Name
pre T cell antigen receptor alphaprovided by MGI
Primary source
MGI:MGI:104857
See related
Ensembl:ENSMUSG00000036858 Vega:OTTMUSG00000045088
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
pTa; gp33; pT[a]; pTalpha; pT-alpha; pT-alpha-TCR
Orthologs
Location:
17; 17 D-E1
Exon count:
4
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 17 NC_000083.6 (46755663..46763712, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (46892612..46900661, complement)

Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene glycine N-methyltransferase Neighboring gene canopy FGF signaling regulator 3 Neighboring gene RIKEN cDNA 2310039H08 gene Neighboring gene ribosomal protein L7-like 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
negative regulation of thymocyte apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
pre T-cell antigen receptor alpha

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011195.2NP_035325.1  pre T-cell antigen receptor alpha precursor

    See identical proteins and their annotated locations for NP_035325.1

    Status: VALIDATED

    Source sequence(s)
    BC119062, U16958
    Consensus CDS
    CCDS28840.1
    UniProtKB/Swiss-Prot
    P0C6B2
    UniProtKB/TrEMBL
    A0A0R4J0F4
    Related
    ENSMUSP00000035683, OTTMUSP00000066121, ENSMUST00000041012, OTTMUST00000118474
    Conserved Domains (1) summary
    pfam15028
    Location:27180
    PTCRA; Pre-T-cell antigen receptor

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000083.6 Reference GRCm38.p3 C57BL/6J

    Range
    46755663..46763712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000039.1 Alternate Mm_Celera

    Range
    50191264..50199524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)