Pax6 paired box gene 6 [Mus musculus (house mouse)] - Gene

Summary

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Official Symbol: Pax6provided by MGI
Official Full Name: paired box gene 6provided by MGI
Primary source: MGI:97490
Locus tag: RP23-431C3.1
See related: Ensembl:ENSMUSG00000027168; Vega:OTTMUSG00000015006
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Dey; Sey; AEY11; Pax-6; Gsfaey11; 1500038E17Rik

Genomic context

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Location :: 2 E3; 2 55.31 cM

Sequence :: Chromosome: 2; NC_000068.7 (105668896..105697364)

See Pax6 in Epigenomics, MapViewer

Chromosome 2 - NC_000068.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

Bibliography

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GeneRIFs: Gene References Into Functions What's a GeneRIF?

proSAAS as a novel down-regulated target of Pax6
Title: Pax6 directly down-regulates Pcsk1n expression thereby regulating PC1/3 dependent proinsulin processing.
Dexamethasone in combination with methylisobutylxanthine (DM) induces Cyp1b1 and a 6.7 kb mouse Cyp1b1 promoter-luciferase reporter in each cell type prior to adipogenesis. An 18 base sequence (at -6.11 kb) (PaxE) which was essential for this reporter stimulation in 3T3-L1 cells bound the transcription factor Pax6.
Title: Stimulation of mouse Cyp1b1 during adipogenesis: characterization of promoter activation by the transcription factor Pax6.
Pax6 achieves its key roles in the developing forebrain by utilizing particular subdomains to coordinate patterning, neurogenesis and proliferation simultaneously.
Title: Functional dissection of the paired domain of Pax6 reveals molecular mechanisms of coordinating neurogenesis and proliferation.
The identification of candidate genes that represent direct or indirect Pax6-downstream genes involved in cerebellar development.
Title: Genome-wide microarray comparison reveals downstream genes of Pax6 in the developing mouse cerebellum.
these results suggest that Tip60 binds with Pax6 and that this physical interaction leads to the full-transcriptional activation of Pax6 during retina development.
Title: Transcriptional activity of paired homeobox Pax6 is enhanced by histone acetyltransferase Tip60 during mouse retina development.
miR-7a fine-tunes Pax6 expression as a mechanism for controlling neuronal stem cell diversity and, consequently, neuronal phenotype.
Title: miR-7a regulation of Pax6 controls spatial origin of forebrain dopaminergic neurons.
the expression of Pax6 severely impairs tumor propagation by inducing a reduction of cell proliferation and the acquisition of differentiation traits in tumor-initiating cells.
Title: Antagonistic modulation of gliomagenesis by Pax6 and Olig2 in PDGF-induced oligodendroglioma.
in the retinal pigment epithelium(RPE) , PAX6 cooperates with either one (or both) of two related RPE transcription factors, MITF and TFEC, to suppress extracellular signals that in the normal retina induce a signaling cascade promoting retina formation.
Title: A regulatory loop involving PAX6, MITF, and WNT signaling controls retinal pigment epithelium development.
The data show key roles for endogenous Dhh signalling in maintenance and regeneration of the corneal epithelium, demonstrate an interaction between Pax6 and hedgehog signalling in the corneal epithelium.
Title: Interaction between hedgehog signalling and PAX6 dosage mediates maintenance and regeneration of the corneal epithelium.
Modulation in the expression of Pax6 and reduction in Pax6 positive cells show direct association of Pax6 with aging-related neuronal dystrophy.
Title: Aging-associated modulation in the expression of Pax6 in mouse brain.

Submit: New GeneRIF Correction See all (153)

Alleles

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Alleles of this type are documented at Mouse Genome Informatics (MGI)

Spontaneous (2)
Targeted (other) (1) 1 citation
Chemically induced (other) (1) 1 citation
Chemically and radiation induced (3) 1 citation
Radiation induced (2) 1 citation
Targeted (Floxed/Frt) (3) 1 citation
Targeted (knock-out) (3) 1 citation
Targeted (Reporter) (1) 1 citation
Chemically induced (ENU) (22) 1 citation

Interactions

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Products	Interactant	Other Gene	Source	Pubs	Description
AAH36957.1	NP_032627.1	Mitf	BIND	PubMed	The p46 isoform of Pax6 interacts with Mitf. This interaction was modeled on a demonstrated interaction between Quail Pax6 and mouse Mitf.
AAH36957.1	NP_038861.1	Rax	BIND	PubMed	Homeodomain protein Pax6 interacts with homeodomain protein Rax. This interaction was modeled on a demonstrated interaction between zebrafish Pax6 and mouse Rax.
AAH36957.1	NP_031727.1	Vsx2	BIND	PubMed	Pax6 interacts with Chx10. This interaction was modeled on a demonstrated interaction between zebrafish Pax6 and mouse Chx10.
NP_038655.1	NP_032627.1	Mitf	BIND	PubMed	The p48 isoform of Pax6 interacts with Mitf. This interaction was modeled on a demonstrated interaction between Quail Pax6 and mouse Mitf.
BioGRID:202033	BioGRID:114206	DYNLL1	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:114843	HOMER3	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:228438	Hdac10	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:200373	Hoxa9	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:200384	Hoxc12	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:201281	Maf	BioGRID	PubMed	Affinity Capture-Western
BioGRID:202033	BioGRID:201014	Mafb	BioGRID	PubMed	Affinity Capture-Western
BioGRID:202033	BioGRID:201487	Meis2	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:201427	Mitf	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:111114	PAX6	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:248015	Sox10	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:203406	Sox2	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:204420	Sumo1	BioGRID	PubMed	Affinity Capture-Western
BioGRID:202033	BioGRID:123523	TRIM11	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:204905	Vax2	BioGRID	PubMed	Two-hybrid
BioGRID:202033	BioGRID:198710	Vsx2	BioGRID	PubMed	Two-hybrid

Pathways from BioSystems

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Incretin Synthesis, Secretion, and Inactivation, organism-specific biosystem (from REACTOME)
Incretin Synthesis, Secretion, and Inactivation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Maturity onset diabetes of the young, organism-specific biosystem (from KEGG)
Maturity onset diabetes of the young, organism-specific biosystemAbout 2-5% of type II diabetic patients suffer from a monogenic disease with autosomal dominant inheritance. This monogenic form of type II diabetes is called maturity onset diabetes of the young (MO...
Maturity onset diabetes of the young, conserved biosystem (from KEGG)
Maturity onset diabetes of the young, conserved biosystemAbout 2-5% of type II diabetic patients suffer from a monogenic disease with autosomal dominant inheritance. This monogenic form of type II diabetes is called maturity onset diabetes of the young (MO...
Metabolism of proteins, organism-specific biosystem (from REACTOME)
Metabolism of proteins, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Peptide hormone metabolism, organism-specific biosystem (from REACTOME)
Peptide hormone metabolism, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Synthesis, Secretion, and Inactivation of Glucagon-like Peptide-1 (GLP-1), organism-specific biosystem (from REACTOME)
Synthesis, Secretion, and Inactivation of Glucagon-like Peptide-1 (GLP-1), organism-specific biosystemcomputationally inferred pathway (not manually curated)
Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP), organism-specific biosystem (from REACTOME)
Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP), organism-specific biosystemcomputationally inferred pathway (not manually curated)
XPodNet - protein-protein interactions in the podocyte expanded by STRING, organism-specific biosystem (from WikiPathways)
XPodNet - protein-protein interactions in the podocyte expanded by STRING, organism-specific biosystemXPodNet is a larger version of PodNet. Interactions from STRING database have been added to PodNet to build XPodNet. Hence, not all interactions found in XPodNet do necessarily have to be curated.

General gene information

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Markers

Pax6 (e-PCR), detects polymorphism
- UniSTS:530695

D12Bir2 (e-PCR), detects polymorphism
- UniSTS:141835

GDB:344354 (e-PCR)
- UniSTS:156688

Pax6 (e-PCR), detects polymorphism
- UniSTS:234061

Pax6 (e-PCR), detects polymorphism
- UniSTS:238168

PMC186446P1 (e-PCR)
- UniSTS:271709

Pax6 (e-PCR), detects polymorphism
- UniSTS:265609

Pax6 (e-PCR), detects polymorphism
- UniSTS:265610

Pax6 (e-PCR), detects polymorphism
- UniSTS:466069

Pax6 (e-PCR), detects polymorphism
- UniSTS:466070

Pax6 (e-PCR), detects polymorphism
- UniSTS:534423

Pax6 (e-PCR), detects polymorphism
- UniSTS:502695

Pax6 (e-PCR), detects polymorphism
- UniSTS:527029

Pax6 (e-PCR), detects polymorphism
- UniSTS:516565

X63963 (e-PCR)
- UniSTS:163293

Pax6 (e-PCR), detects polymorphism
- UniSTS:546527

Pax6 (e-PCR), detects polymorphism
- UniSTS:546528

Pax6 (e-PCR), detects polymorphism
- UniSTS:546529

Pax6 (e-PCR), detects polymorphism
- UniSTS:546530

Pax6 (e-PCR), detects polymorphism
- UniSTS:507116

Homology

Homologs of the Pax6 gene: The Pax6 gene is conserved in human, Rhesus monkey, cow, rat, chicken, zebrafish, fruit fly, mosquito, and C.elegans.
Map Viewer (Human, Rat)
OrthoDB: The Hierarchical Catalog of Eukaryotic Orthologs

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
AT DNA binding	ISO Inferred from Sequence Orthology more info
DNA binding	IDA Inferred from Direct Assay more info	PubMed
HMG box domain binding	IPI Inferred from Physical Interaction more info	PubMed
R-SMAD binding	IDA Inferred from Direct Assay more info	PubMed
R-SMAD binding	ISO Inferred from Sequence Orthology more info
RNA polymerase II core promoter sequence-specific DNA binding	IDA Inferred from Direct Assay more info
RNA polymerase II core promoter sequence-specific DNA binding	ISO Inferred from Sequence Orthology more info
co-SMAD binding	IDA Inferred from Direct Assay more info	PubMed
double-stranded DNA binding	ISO Inferred from Sequence Orthology more info
histone acetyltransferase binding	IDA Inferred from Direct Assay more info	PubMed
protein binding	IPI Inferred from Physical Interaction more info	PubMed
protein kinase binding	IPI Inferred from Physical Interaction more info	PubMed
sequence-specific DNA binding	ISO Inferred from Sequence Orthology more info
sequence-specific DNA binding RNA polymerase II transcription factor activity	IDA Inferred from Direct Assay more info
sequence-specific DNA binding RNA polymerase II transcription factor activity	ISO Inferred from Sequence Orthology more info
sequence-specific DNA binding transcription factor activity	IDA Inferred from Direct Assay more info	PubMed
sequence-specific DNA binding transcription factor activity	TAS Traceable Author Statement more info	PubMed
transcription factor binding	IPI Inferred from Physical Interaction more info	PubMed
transcription regulatory region DNA binding	IDA Inferred from Direct Assay more info	PubMed
ubiquitin protein ligase binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
anterior/posterior pattern specification	IGI Inferred from Genetic Interaction more info	PubMed
anterior/posterior pattern specification	IMP Inferred from Mutant Phenotype more info	PubMed
astrocyte differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
axon guidance	IMP Inferred from Mutant Phenotype more info	PubMed
axonogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
blood vessel development	ISO Inferred from Sequence Orthology more info
brain development	IMP Inferred from Mutant Phenotype more info	PubMed
brain development	ISO Inferred from Sequence Orthology more info
camera-type eye development	IGI Inferred from Genetic Interaction more info	PubMed
camera-type eye development	IMP Inferred from Mutant Phenotype more info	PubMed
cell differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
cell fate commitment	IGI Inferred from Genetic Interaction more info	PubMed
cell fate commitment	IMP Inferred from Mutant Phenotype more info	PubMed
cell fate determination	IMP Inferred from Mutant Phenotype more info	PubMed
cerebral cortex regionalization	IMP Inferred from Mutant Phenotype more info	PubMed
commitment of neuronal cell to specific neuron type in forebrain	IMP Inferred from Mutant Phenotype more info	PubMed
cornea development in camera-type eye	ISO Inferred from Sequence Orthology more info
dorsal/ventral axis specification	IMP Inferred from Mutant Phenotype more info	PubMed
dorsal/ventral pattern formation	IMP Inferred from Mutant Phenotype more info	PubMed
embryonic camera-type eye morphogenesis	IGI Inferred from Genetic Interaction more info	PubMed
eye photoreceptor cell development	IMP Inferred from Mutant Phenotype more info	PubMed
forebrain anterior/posterior pattern specification	IMP Inferred from Mutant Phenotype more info	PubMed
forebrain development	IMP Inferred from Mutant Phenotype more info	PubMed
forebrain dorsal/ventral pattern formation	IMP Inferred from Mutant Phenotype more info	PubMed
forebrain-midbrain boundary formation	IMP Inferred from Mutant Phenotype more info	PubMed
glucose homeostasis	ISO Inferred from Sequence Orthology more info
hindbrain development	ISO Inferred from Sequence Orthology more info
iris morphogenesis	ISO Inferred from Sequence Orthology more info
keratinocyte differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
lacrimal gland development	IMP Inferred from Mutant Phenotype more info	PubMed
lens development in camera-type eye	IMP Inferred from Mutant Phenotype more info	PubMed
multicellular organismal development	IEA Inferred from Electronic Annotation more info
negative regulation of cell proliferation	IMP Inferred from Mutant Phenotype more info	PubMed
negative regulation of epithelial cell proliferation	IMP Inferred from Mutant Phenotype more info	PubMed
negative regulation of neuron differentiation	IGI Inferred from Genetic Interaction more info	PubMed
neuron migration	IMP Inferred from Mutant Phenotype more info	PubMed
neuron migration	ISO Inferred from Sequence Orthology more info
oligodendrocyte cell fate specification	IMP Inferred from Mutant Phenotype more info	PubMed
pallium development	IMP Inferred from Mutant Phenotype more info	PubMed
pancreatic A cell development	IMP Inferred from Mutant Phenotype more info
pancreatic A cell development	ISO Inferred from Sequence Orthology more info
pituitary gland development	IMP Inferred from Mutant Phenotype more info	PubMed
positive regulation of cell fate specification	ISO Inferred from Sequence Orthology more info
positive regulation of epithelial cell differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
positive regulation of gene expression	IMP Inferred from Mutant Phenotype more info
positive regulation of gene expression	ISO Inferred from Sequence Orthology more info
positive regulation of neuroblast proliferation	IMP Inferred from Mutant Phenotype more info	PubMed
positive regulation of transcription from RNA polymerase II promoter	IDA Inferred from Direct Assay more info	PubMed
positive regulation of transcription, DNA-dependent	IDA Inferred from Direct Assay more info
positive regulation of transcription, DNA-dependent	ISO Inferred from Sequence Orthology more info
protein localization to organelle	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of cell migration	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of epithelial cell proliferation	ISO Inferred from Sequence Orthology more info
regulation of gene expression	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of neurogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of neurogenesis	ISO Inferred from Sequence Orthology more info
regulation of neuron differentiation	ISO Inferred from Sequence Orthology more info
regulation of timing of cell differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of transcription from RNA polymerase II promoter	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification	IMP Inferred from Mutant Phenotype more info	PubMed
regulation of transcription, DNA-dependent	TAS Traceable Author Statement more info	PubMed
salivary gland morphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
signal transduction involved in regulation of gene expression	IDA Inferred from Direct Assay more info	PubMed
smoothened signaling pathway	IDA Inferred from Direct Assay more info	PubMed
transcription from RNA polymerase II promoter	IMP Inferred from Mutant Phenotype more info
transcription from RNA polymerase II promoter	ISO Inferred from Sequence Orthology more info
transcription, DNA-dependent	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
cytoplasm	ISO Inferred from Sequence Orthology more info
intracellular	IDA Inferred from Direct Assay more info	PubMed
intracellular part	IDA Inferred from Direct Assay more info	PubMed
nuclear chromatin	IDA Inferred from Direct Assay more info
nuclear chromatin	ISO Inferred from Sequence Orthology more info
nucleus	IDA Inferred from Direct Assay more info	PubMed
nucleus	ISO Inferred from Sequence Orthology more info
transcription factor complex	TAS Traceable Author Statement more info	PubMed

General protein information

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Preferred Names: paired box protein Pax-6

Names: paired box protein Pax-6; small eye; oculorhombin; Dickie's small eye

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001244198.1 → NP_001231127.1 paired box protein Pax-6 isoform 1

Status: VALIDATED

Description

Transcript Variant: This variant (1) encodes the longer isoform (1).

Source sequence(s)

AK032616, BC036957, X63963

Consensus CDS

CCDS16499.1

UniProtKB/Swiss-Prot

P63015

Conserved Domains (3) summary

cd00086
Location:227 – 283
Blast Score: 198

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

cd00131
Location:5 – 145
Blast Score: 568

PAX; Paired Box domain

smart00351
Location:4 – 142
Blast Score: 610

PAX; Paired Box domain
NM_001244200.1 → NP_001231129.1 paired box protein Pax-6 isoform 1

Status: VALIDATED

Description

Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein (isoform 1).

Source sequence(s)

AK047243, AY064175, BC036957, CF725212, X63963

Consensus CDS

CCDS16499.1

UniProtKB/Swiss-Prot

P63015

UniProtKB/TrEMBL

Q8VBX9

Related

ENSMUSP00000129344, ENSMUST00000167211

Conserved Domains (3) summary

cd00086
Location:227 – 283
Blast Score: 198

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

cd00131
Location:5 – 145
Blast Score: 568

PAX; Paired Box domain

smart00351
Location:4 – 142
Blast Score: 610

PAX; Paired Box domain
NM_001244201.1 → NP_001231130.1 paired box protein Pax-6 isoform 2

Status: VALIDATED

Description

Transcript Variant: This variant (4) differs in the 5' UTR and lacks an in-frame coding exon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.

Source sequence(s)

AK032616, BC036957

Consensus CDS

CCDS57181.1

UniProtKB/Swiss-Prot

P63015

Related

ENSMUSP00000106716, OTTMUSP00000015973, ENSMUST00000111087, OTTMUST00000035641

Conserved Domains (3) summary

smart00351
Location:4 – 128
Blast Score: 632

PAX; Paired Box domain

cd00086
Location:214 – 269
Blast Score: 224

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

cd00131
Location:5 – 131
Blast Score: 642

PAX; Paired Box domain
NM_001244202.1 → NP_001231131.1 paired box protein Pax-6 isoform 2

Status: VALIDATED

Description

Transcript Variant: This variant (5) differs in the 5' UTR and lacks an in-frame coding exon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.

Source sequence(s)

AK045805, BC036957, BF466986

Consensus CDS

CCDS57181.1

UniProtKB/Swiss-Prot

P63015

Related

ENSMUSP00000106711, OTTMUSP00000015979, ENSMUST00000111082, OTTMUST00000035649

Conserved Domains (3) summary

smart00351
Location:4 – 128
Blast Score: 632

PAX; Paired Box domain

cd00086
Location:214 – 269
Blast Score: 224

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

cd00131
Location:5 – 131
Blast Score: 642

PAX; Paired Box domain
NM_013627.5 → NP_038655.1 paired box protein Pax-6 isoform 1

Status: VALIDATED

Description

Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein (isoform 1).

Source sequence(s)

AK045805, BC036957, BF466986, X63963

Consensus CDS

CCDS16499.1

UniProtKB/Swiss-Prot

P63015

Related

ENSMUSP00000087870, OTTMUSP00000015980, ENSMUST00000090391, OTTMUST00000035650

Conserved Domains (3) summary

cd00086
Location:227 – 283
Blast Score: 198

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

cd00131
Location:5 – 145
Blast Score: 568

PAX; Paired Box domain

smart00351
Location:4 – 142
Blast Score: 610

PAX; Paired Box domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 103

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p1 C57BL/6J

Genomic

NC_000068.7 Reference GRCm38.p1 C57BL/6J

Range

105668896..105697364

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

AC_000024.1 Alternate Mm_Celera

Range

106890276..106918747

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Nucleotide		Protein	Strain
Heading	Accession and Version	Protein	Strain
genomic	AAHY01019295.1 (25427..53898)	None
genomic	AF008212.1	None
genomic	AF008213.1	None
genomic	AF098639.1	None
genomic	AF098640.1	None
genomic	AL512589.4 (60243..88711)	None
genomic	CH466519.1	EDL27745.1	mixed
		EDL27746.1	mixed
		EDL27747.1	mixed
		EDL27748.1	mixed
		EDL27749.1	mixed
genomic	Y19193.1	CAC80514.1	C3H
genomic	Y19195.1	CAC80515.1	C3H
genomic	Y19196.1	CAC80516.1	C3H
genomic	Y19197.1	CAC80517.1	C3H
genomic	Y19198.1	CAC80518.1	C3H
genomic	Y19199.1	CAC80519.1	C3H
mRNA	AF443223.1	AAL38015.1	C57BL
mRNA	AF457141.1	AAL67742.1	C57BL/6
mRNA	AF457142.1	AAL67743.1	C57BL/6
mRNA	AJ292077.1	CAC83743.1	C3H
mRNA	AJ307468.1	CAC83748.1	C3H
mRNA	AK028059.1	BAC25729.1	C57BL/6J
mRNA	AK032616.1	None	C57BL/6J
mRNA	AK045805.1	None	C57BL/6J
mRNA	AK047243.1	None	C57BL/6J
mRNA	AK080416.1	None	C57BL/6J
mRNA	AK139054.1	BAE23875.1	C57BL/6J
mRNA	AK140480.1	None	C57BL/6J
mRNA	AK162553.1	BAE36966.1	C57BL/6J
mRNA	AY064175.1	AAL40860.1	C57BL/6
mRNA	BC011272.1	AAH11272.1	CZECHII
mRNA	BC036957.1	AAH36957.1
mRNA	BC069912.1	None
mRNA	BF466986.1	None	C57BL/6J
mRNA	CF725212.1	None	C57BL/6
mRNA	M77842.1	AAA40109.1
mRNA	X63963.1	CAA45379.1
		CAA45380.1