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grl-17 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 183855, updated on 24-Apr-2022

Summary

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Gene symbol
grl-17
Gene description
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001726
Locus tag
CELE_C56A3.1
See related
AllianceGenome:WB:WBGene00001726
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in head; hypodermis; interfacial epithelial cell; and pharynx. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (13561973..13563941, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene EF-hand domain-containing protein Neighboring gene Caveolin-2 Neighboring gene Phosphatidylinositol 4-kinase type 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RRM domain-containing protein Neighboring gene putative complex I intermediate-associated protein 30, mitochondrial Neighboring gene Baculoviral IAP repeat-containing protein bir-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential gene expression of Caenorhabditis elegans grown on unmethylated sterols or 4alpha-methylsterols. Merris M, et al. J Lipid Res, 2007 May. PMID 17277379
  2. Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. Aspöck G, et al. Genome Res, 1999 Oct. PMID 10523520
  3. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  4. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  5. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_506359.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    13561973..13563941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073958.3 → NP_506359.1  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506359.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18880
    Conserved Domains (1) summary
    pfam04155
    Location:317 → 389
    Ground-like; Ground-like domain
Nucleotide Protein
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