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Nobox NOBOX oogenesis homeobox [ Mus musculus (house mouse) ]

Gene ID: 18291, updated on 16-Dec-2014
Official Symbol
Noboxprovided by MGI
Official Full Name
NOBOX oogenesis homeoboxprovided by MGI
Primary source
MGI:MGI:108011
See related
Ensembl:ENSMUSG00000029736; Vega:OTTMUSG00000037623
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
OG2; Og2x
See Nobox in Epigenomics, MapViewer
Location:
6 B2.1; 6 21.17 cM
Exon count:
11
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 6 NC_000072.6 (43303674..43317234, complement)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene olfactory receptor 47 Neighboring gene Rho guanine nucleotide exchange factor (GEF) 5 Neighboring gene thiamine pyrophosphokinase Neighboring gene 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase pseudogene Neighboring gene predicted gene, 35113

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • PluriNetWork, organism-specific biosystem (from WikiPathways)
    PluriNetWork, organism-specific biosystemThe aim of the PluriNetWork is to give an overview of specific mechanisms associated with pluripotency in mouse. Each node represents a gene and its corresponding protein product. As stated, we inten...

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
multicellular organismal development IEA
Inferred from Electronic Annotation
more info
 
oogenesis IEA
Inferred from Electronic Annotation
more info
 
ovarian follicle development IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of transcription from RNA polymerase II promoter IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
transcription factor complex IC
Inferred by Curator
more info
PubMed 
Preferred Names
homeobox protein NOBOX
Names
homeobox protein NOBOX
OG2 homeobox
newborn ovary homeobox protein
oocyte-specific homeobox protein
homeodomain-containing protein OG-2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_130869.3NP_570939.1  homeobox protein NOBOX

    See proteins identical to NP_570939.1

    Status: PROVISIONAL

    Source sequence(s)
    AC153885
    Consensus CDS
    CCDS20093.1
    UniProtKB/Swiss-Prot
    Q8VIH1
    Related
    ENSMUSP00000031749, OTTMUSP00000054348, ENSMUST00000031749, OTTMUST00000097059
    Conserved Domains (2) summary
    COG5576
    Location:94213
    COG5576; Homeodomain-containing transcription factor [Transcription]
    cd00086
    Location:137193
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000072.6 

    Range
    43303674..43317234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006505719.1XP_006505782.1  

    See proteins identical to XP_006505782.1

    Conserved Domains (2) summary
    COG5576
    Location:127246
    COG5576; Homeodomain-containing transcription factor [Transcription]
    cd00086
    Location:170228
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  2. XM_006505717.1XP_006505780.1  

    See proteins identical to XP_006505780.1

    Conserved Domains (2) summary
    COG5576
    Location:127246
    COG5576; Homeodomain-containing transcription factor [Transcription]
    cd00086
    Location:170228
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  3. XM_006505718.1XP_006505781.1  

    Conserved Domains (2) summary
    COG5576
    Location:127246
    COG5576; Homeodomain-containing transcription factor [Transcription]
    cd00086
    Location:170226
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

Alternate Mm_Celera

Genomic

  1. AC_000028.1 

    Range
    43251662..43257542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)