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Ctnnd2 catenin (cadherin associated protein), delta 2 [ Mus musculus (house mouse) ]

Gene ID: 18163, updated on 7-Feb-2016
Official Symbol
Ctnnd2provided by MGI
Official Full Name
catenin (cadherin associated protein), delta 2provided by MGI
Primary source
MGI:MGI:1195966
See related
Ensembl:ENSMUSG00000022240
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nprap; Catnd2; neurojugin
Orthologs
See Ctnnd2 in Epigenomics, MapViewer
Location:
15; 15 B2
Exon count:
24
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 15 NC_000081.6 (30172593..31029344)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (30102348..30959099)

Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene microRNA 3964 Neighboring gene 60S ribosomal protein L5 pseudogene Neighboring gene predicted gene, 31953 Neighboring gene predicted gene, 41284 Neighboring gene predicted gene, 31841 Neighboring gene predicted gene, 41283 Neighboring gene RIKEN cDNA 4930430F21 gene Neighboring gene predicted gene, 41282 Neighboring gene predicted gene, 32011

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
beta-catenin binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cell adhesion IEA
Inferred from Electronic Annotation
more info
 
dendritic spine morphogenesis ISO
Inferred from Sequence Orthology
more info
 
learning IMP
Inferred from Mutant Phenotype
more info
PubMed 
morphogenesis of a branching structure IDA
Inferred from Direct Assay
more info
PubMed 
multicellular organismal development IEA
Inferred from Electronic Annotation
more info
 
regulation of canonical Wnt signaling pathway ISO
Inferred from Sequence Orthology
more info
 
regulation of synaptic plasticity IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
single organismal cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 
synapse organization ISO
Inferred from Sequence Orthology
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell junction IEA
Inferred from Electronic Annotation
more info
 
cell projection IEA
Inferred from Electronic Annotation
more info
 
neuron projection ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
perikaryon ISO
Inferred from Sequence Orthology
more info
 
postsynaptic density IDA
Inferred from Direct Assay
more info
PubMed 
postsynaptic density ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
catenin delta-2
Names
catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
catenin delta 2
neural plakophilin-related arm-repeat protein
neurojungin

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008729.2NP_032755.2  catenin delta-2

    Status: VALIDATED

    Source sequence(s)
    AK152167, BE847220, BU611309, U90331
    Consensus CDS
    CCDS27405.1
    UniProtKB/TrEMBL
    E9QKH8
    UniProtKB/Swiss-Prot
    O35927
    UniProtKB/TrEMBL
    Q3U8L7
    Related
    ENSMUSP00000080427, ENSMUST00000081728
    Conserved Domains (1) summary
    cd00020
    Location:540662
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000081.6 Reference GRCm38.p3 C57BL/6J

    Range
    30172593..31029344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006520032.2XP_006520095.1  

    See identical proteins and their annotated locations for XP_006520095.1

    UniProtKB/TrEMBL
    B7ZNF6
    Conserved Domains (2) summary
    smart00185
    Location:9701014
    ARM; Armadillo/beta-catenin-like repeats
    cd00020
    Location:540662
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
  2. XM_006520033.2XP_006520096.1  

    Conserved Domains (1) summary
    cd00020
    Location:449571
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

Alternate Mm_Celera

Genomic

  1. AC_000037.1 Alternate Mm_Celera

    Range
    30892803..31737347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)