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LOC18104861 WUSCHEL-related homeobox 4 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18104861, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18104861
Gene description
WUSCHEL-related homeobox 4
Locus tag
POPTR_014G025300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 14 NC_037298.2 (1556767..1557965)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 14 NC_037298.1 (2169707..2171008)

Chromosome 14 - NC_037298.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18104859 Neighboring gene ethylene-responsive transcription factor RAP2-1 Neighboring gene polyadenylate-binding protein 2 Neighboring gene uncharacterized acetyltransferase At3g50280

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phloem or xylem histogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in procambium histogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WUSCHEL-related homeobox 4
Names
WOX family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037298.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    1556767..1557965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006374841.3 → XP_006374903.1  WUSCHEL-related homeobox 4

    See identical proteins and their annotated locations for XP_006374903.1

    UniProtKB/TrEMBL
    A9PBT6, B9MVU1
    Conserved Domains (1) summary
    pfam00046
    Location:78 → 137
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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