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Mrpl40 mitochondrial ribosomal protein L40 [ Mus musculus (house mouse) ]

Gene ID: 18100, updated on 8-May-2016
Official Symbol
Mrpl40provided by MGI
Official Full Name
mitochondrial ribosomal protein L40provided by MGI
Primary source
MGI:MGI:1332635
See related
Ensembl:ENSMUSG00000022706 Vega:OTTMUSG00000026128
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nlvcf
Orthologs
Location:
16 A3; 16 11.69 cM
Exon count:
4
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 16 NC_000082.6 (18872018..18876637, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (18872111..18876730, complement)

Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene cell division cycle 45 Neighboring gene RIKEN cDNA 2510002D24 gene Neighboring gene ubiquitin fusion degradation 1 like Neighboring gene histone cell cycle regulator Neighboring gene U2 small nuclear ribonucleoprotein B pseudogene

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
intracellular ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
mitochondrial ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
mitochondrial ribosome ISO
Inferred from Sequence Orthology
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
39S ribosomal protein L40, mitochondrial
Names
L40mt
MRP-L40
nuclear localization signal protein absent in velo-cardio-facial patients
nuclear localization signal-containing protein deleted in velocardiofacial syndrome homolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010922.2NP_035052.2  39S ribosomal protein L40, mitochondrial precursor

    See identical proteins and their annotated locations for NP_035052.2

    Status: VALIDATED

    Source sequence(s)
    AA240860, AK145885
    Consensus CDS
    CCDS28030.1
    UniProtKB/Swiss-Prot
    Q9Z2Q5
    UniProtKB/TrEMBL
    Q3UKS6
    Related
    ENSMUSP00000023391, OTTMUSP00000032062, ENSMUST00000023391, OTTMUST00000064524
    Conserved Domains (1) summary
    pfam09812
    Location:45199
    MRP-L28; Mitochondrial ribosomal protein L28

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000082.6 Reference GRCm38.p3 C57BL/6J

    Range
    18872018..18876637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCm38.p3 129S1/SvImJ

Genomic

  1. NT_187008.1 Reference GRCm38.p3 129S1/SvImJ

    Range
    175698..180317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000038.1 Alternate Mm_Celera

    Range
    19446075..19450694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)