U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18099553 probable WRKY transcription factor 7 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18099553, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18099553
Gene description
probable WRKY transcription factor 7
Locus tag
POPTR_005G141400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 5 NC_037289.2 (11312342..11314228, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 5 NC_037289.1 (11954702..11956477, complement)

Chromosome 5 - NC_037289.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112327567 Neighboring gene protein IRX15-LIKE Neighboring gene probable beta-1,4-xylosyltransferase IRX14H Neighboring gene cysteine proteinase COT44

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable WRKY transcription factor 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037289.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    11312342..11314228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024600511.2 → XP_024456279.2  probable WRKY transcription factor 7 isoform X1

  2. XM_006383468.3 → XP_006383530.2  probable WRKY transcription factor 7 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases