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LOC18038669 WRKY transcription factor 44 [ Citrus x clementina ]

Gene ID: 18038669, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18038669
Gene description
WRKY transcription factor 44
Locus tag
CICLE_v10011660mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262139.1 (11953894..11959752)

NW_006262139.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 1, chloroplastic Neighboring gene two-component response regulator-like APRR7 Neighboring gene probable serine/threonine-protein kinase PBL7 Neighboring gene ecotropic viral integration site 5 protein homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262139 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY transcription factor 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262139.1 Reference Citrus_clementina_v1.0

    Range
    11953894..11959752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024182364.1 → XP_024038132.1  WRKY transcription factor 44 isoform X1

    UniProtKB/TrEMBL
    V4URL8
    Conserved Domains (1) summary
    pfam03106
    Location:388 → 443
    WRKY; WRKY DNA -binding domain

  2. XM_006428856.2 → XP_006428919.1  WRKY transcription factor 44 isoform X1

    See identical proteins and their annotated locations for XP_006428919.1

    UniProtKB/TrEMBL
    V4URL8
    Conserved Domains (1) summary
    pfam03106
    Location:388 → 443
    WRKY; WRKY DNA -binding domain

  3. XM_024182366.1 → XP_024038134.1  WRKY transcription factor 44 isoform X2

    Conserved Domains (1) summary
    pfam03106
    Location:387 → 442
    WRKY; WRKY DNA -binding domain

  4. XM_024182365.1 → XP_024038133.1  WRKY transcription factor 44 isoform X1

    UniProtKB/TrEMBL
    V4URL8
    Conserved Domains (1) summary
    pfam03106
    Location:388 → 443
    WRKY; WRKY DNA -binding domain

RNA

  1. XR_002904932.1 RNA Sequence

  2. XR_002904931.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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