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LOC17877391 transcription factor TT2 [ Capsella rubella ]

Gene ID: 17877391, updated on 3-Jun-2019

Summary

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Gene symbol
LOC17877391
Gene description
transcription factor TT2
Locus tag
CARUB_v10006684mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238917.1 (13823677..13824874)

NW_006238917.1Genomic Context describing neighboring genes Neighboring gene protein MIS12 homolog Neighboring gene 40S ribosomal protein S3-3 Neighboring gene uncharacterized LOC17878809 Neighboring gene uncharacterized LOC17878393

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238917 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcription factor TT2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238917.1 Reference Caprub1_0

    Range
    13823677..13824874
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006282771.2 → XP_006282833.1  transcription factor TT2 isoform X1

    See identical proteins and their annotated locations for XP_006282833.1

    UniProtKB/TrEMBL
    R0F2Z7
    Conserved Domains (2) summary
    smart00717
    Location:70 → 117
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:70 → 115
    Myb_DNA-binding; Myb-like DNA-binding domain

  2. XM_023778400.1 → XP_023634168.1  transcription factor TT2 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases