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Fam89b family with sequence similarity 89, member B [ Mus musculus (house mouse) ]

Gene ID: 17826, updated on 19-Jul-2014
Official Symbol
Fam89bprovided by MGI
Official Full Name
family with sequence similarity 89, member Bprovided by MGI
Primary source
MGI:106595
See related
Ensembl:ENSMUSG00000024939; Vega:OTTMUSG00000035064
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MMTV; Mtvr2; 1110021A21Rik
See Fam89b in Epigenomics, MapViewer
Location:
19 A; 19 4.34 cM
Exon count :
2
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 19 NC_000085.6 (5728087..5729666, complement)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene potassium channel, subfamily K, member 7 Neighboring gene EH domain binding protein 1-like 1 Neighboring gene Sjogren's syndrome/scleroderma autoantigen 1 homolog (human) Neighboring gene latent transforming growth factor beta binding protein 3 Neighboring gene SCY1-like 1 (S. cerevisiae)

Markers

Potential readthrough

Included gene: Sssca1

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
transcription corepressor binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
protein FAM89B
Names
protein FAM89B
C184M protein
MMTV receptor
mammary tumor virus receptor 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023166.2NP_075655.2  protein FAM89B isoform 2

    See proteins identical to NP_075655.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
    Source sequence(s)
    BC056166, CJ132526
    Consensus CDS
    CCDS50361.1
    UniProtKB/TrEMBL
    Q7TMI7
    Related
    ENSMUSP00000124294, OTTMUSP00000048707, ENSMUST00000161368, OTTMUST00000089210
  2. NM_181452.2NP_852117.2  protein FAM89B isoform 1

    See proteins identical to NP_852117.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    BC056166, BM942073, CJ132526
    Consensus CDS
    CCDS37890.1
    UniProtKB/TrEMBL
    Q7TMI7
    UniProtKB/Swiss-Prot
    Q9QUI1
    Related
    ENSMUSP00000097538, OTTMUSP00000048705, ENSMUST00000099955, OTTMUST00000089208
    Conserved Domains (1) summary
    pfam14854
    Location:74127
    Blast Score: 83
    LURAP; Leucine rich adaptor protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000085.6 

    Range
    5728087..5729666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000041.1 

    Range
    5598137..5599716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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