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F10E7.1 ATP-dependent DNA helicase [ Caenorhabditis elegans ]

Gene ID: 174172, updated on 11-Apr-2024

Summary

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Gene symbol
F10E7.1
Gene description
ATP-dependent DNA helicase
Primary source
WormBase:WBGene00017343
Locus tag
CELE_F10E7.1
See related
AllianceGenome:WB:WBGene00017343
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: II
Exon count:
7
Sequence:
Chromosome: II; NC_003280.10 (7126757..7128992)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ELM2 domain-containing protein Neighboring gene ncRNA Neighboring gene C2H2-type domain-containing protein Neighboring gene pseudo Neighboring gene ELM2 domain-containing protein Neighboring gene Defective in germ line development protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in fucosylation IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ATP-dependent DNA helicase
NP_495477.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7126757..7128992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063076.5 → NP_495477.2  ATP-dependent DNA helicase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495477.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19309
    Conserved Domains (1) summary
    pfam06542
    Location:80 → 488
    PHA-1; Regulator protein PHA-1
Nucleotide Protein
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