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Bhlha15 basic helix-loop-helix family, member a15 [ Mus musculus (house mouse) ]

Gene ID: 17341, updated on 17-Mar-2015
Official Symbol
Bhlha15provided by MGI
Official Full Name
basic helix-loop-helix family, member a15provided by MGI
Primary source
MGI:MGI:891976
See related
Ensembl:ENSMUSG00000052271; Vega:OTTMUSG00000025580
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mist1; Bhlhb8; MIST-1; 1810009C13Rik
Orthologs
See Bhlha15 in MapViewer
Location:
5; 5 G2-G3
Exon count:
2
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 5 NC_000071.6 (144190221..144194441)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (144951155..144955310)

Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene lemur tyrosine kinase 2 Neighboring gene uncharacterized LOC105242560 Neighboring gene tectonin beta-propeller repeat containing 1 Neighboring gene RIKEN cDNA 2900089D17 gene Neighboring gene uncharacterized LOC105242391 Neighboring gene brain protein I3

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Maturity onset diabetes of the young, organism-specific biosystem (from KEGG)
    Maturity onset diabetes of the young, organism-specific biosystemAbout 2-5% of type II diabetic patients suffer from a monogenic disease with autosomal dominant inheritance. This monogenic form of type II diabetes is called maturity onset diabetes of the young (MO...
  • Maturity onset diabetes of the young, conserved biosystem (from KEGG)
    Maturity onset diabetes of the young, conserved biosystemAbout 2-5% of type II diabetic patients suffer from a monogenic disease with autosomal dominant inheritance. This monogenic form of type II diabetes is called maturity onset diabetes of the young (MO...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
cell IMP
Inferred from Mutant Phenotype
more info
PubMed 
intracellular IMP
Inferred from Mutant Phenotype
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
PubMed 
Preferred Names
class A basic helix-loop-helix protein 15
Names
class A basic helix-loop-helix protein 15
basic helix-loop-helix domain containing, class B, 8
muscle, intestine and stomach expression 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010800.4NP_034930.1  class A basic helix-loop-helix protein 15

    See proteins identical to NP_034930.1

    Status: VALIDATED

    Source sequence(s)
    AC121845, AK020643
    Consensus CDS
    CCDS19847.1
    UniProtKB/Swiss-Prot
    Q9QYC3
    Related
    ENSMUSP00000055493, OTTMUSP00000031081, ENSMUST00000060747, OTTMUST00000062929
    Conserved Domains (1) summary
    cd00083
    Location:70124
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000071.6 Reference GRCm38.p3 C57BL/6J

    Range
    144190221..144194441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006504808.2XP_006504871.1  

    Conserved Domains (1) summary
    cd00083
    Location:117171
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

Alternate Mm_Celera

Genomic

  1. AC_000027.1 Alternate Mm_Celera

    Range
    141174663..141178820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)