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Marco macrophage receptor with collagenous structure [ Mus musculus (house mouse) ]

Gene ID: 17167, updated on 8-May-2016
Official Symbol
Marcoprovided by MGI
Official Full Name
macrophage receptor with collagenous structureprovided by MGI
Primary source
MGI:MGI:1309998
See related
Ensembl:ENSMUSG00000026390 Vega:OTTMUSG00000049075
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ly112; Scara2; AI323439
Orthologs
Location:
1; 1 E4-F
Exon count:
17
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 1 NC_000067.6 (120474538..120505084, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (122371115..122401661, complement)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene STEAP family member 3 Neighboring gene complement component 1, q subcomponent-like 2 Neighboring gene predicted gene, 41939 Neighboring gene engrailed 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
apoptotic cell clearance IMP
Inferred from Mutant Phenotype
more info
PubMed 
endocytosis IMP
Inferred from Mutant Phenotype
more info
PubMed 
immune system process IEA
Inferred from Electronic Annotation
more info
 
innate immune response IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
collagen trimer IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010766.2NP_034896.1  macrophage receptor MARCO

    See identical proteins and their annotated locations for NP_034896.1

    Status: PROVISIONAL

    Source sequence(s)
    AC125340
    Consensus CDS
    CCDS15234.1
    UniProtKB/Swiss-Prot
    Q60754
    UniProtKB/TrEMBL
    A2RT24
    Related
    ENSMUSP00000027639, OTTMUSP00000067982, ENSMUST00000027639, OTTMUST00000125330
    Conserved Domains (2) summary
    pfam01391
    Location:150207
    Collagen; Collagen triple helix repeat (20 copies)
    smart00202
    Location:423518
    SR; Scavenger receptor Cys-rich

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p3 C57BL/6J

    Range
    120474538..120505084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000023.1 Alternate Mm_Celera

    Range
    123137568..123168212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)