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Magoh mago homolog, exon junction complex core component [ Mus musculus (house mouse) ]

Gene ID: 17149, updated on 17-May-2016
Official Symbol
Magohprovided by MGI
Official Full Name
mago homolog, exon junction complex core componentprovided by MGI
Primary source
MGI:MGI:1330312
See related
Ensembl:ENSMUSG00000028609 Vega:OTTMUSG00000009191
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mos2; Mago-m
Orthologs
Location:
4 C7; 4 50.18 cM
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 4 NC_000070.6 (107879755..107887424)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (107552418..107560003)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3 Neighboring gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor Neighboring gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 2 Neighboring gene RIKEN cDNA 0610037L13 gene Neighboring gene predicted gene, 40220 Neighboring gene carnitine palmitoyltransferase 2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
RNA splicing IBA
Inferred from Biological aspect of Ancestor
more info
 
female gamete generation NAS
Non-traceable Author Statement
more info
PubMed 
mRNA processing IEA
Inferred from Electronic Annotation
more info
 
mRNA transport IEA
Inferred from Electronic Annotation
more info
 
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ISO
Inferred from Sequence Orthology
more info
 
regulation of alternative mRNA splicing, via spliceosome ISO
Inferred from Sequence Orthology
more info
 
regulation of translation IEA
Inferred from Electronic Annotation
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
catalytic step 2 spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
 
catalytic step 2 spliceosome ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
exon-exon junction complex IBA
Inferred from Biological aspect of Ancestor
more info
 
exon-exon junction complex ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
protein mago nashi homolog
Names
mago-nashi homolog, proliferation-associated

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282737.1NP_001269666.1  protein mago nashi homolog

    See identical proteins and their annotated locations for NP_001269666.1

    Status: VALIDATED

    Source sequence(s)
    AK011512, BY134232
    Consensus CDS
    CCDS18441.1
    UniProtKB/Swiss-Prot
    P61327
    Related
    ENSMUSP00000030348, OTTMUSP00000009528, ENSMUST00000030348, OTTMUST00000020785
    Conserved Domains (1) summary
    cd11295
    Location:4146
    Mago_nashi; Mago nashi proteins, integral members of the exon junction complex

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p3 C57BL/6J

    Range
    107879755..107887424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000026.1 Alternate Mm_Celera

    Range
    106228638..106236307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)