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Cd79b CD79b molecule [ Rattus norvegicus (Norway rat) ]

Gene ID: 171055, updated on 26-May-2016
Official Symbol
Cd79bprovided by RGD
Official Full Name
CD79b moleculeprovided by RGD
Primary source
RGD:620012
See related
Ensembl:ENSRNOG00000011917
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Also known as
B29; Igb
Summary
B-cell-specific membrane protein [RGD, Feb 2006]
Orthologs
Location:
10q32.1
Exon count:
6
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (94497445..94500591, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 10 NC_005109.3 (94248655..94251801, complement)

Chromosome 10 - NC_005109.4Genomic Context describing neighboring genes Neighboring gene testicular cell adhesion molecule 1 Neighboring gene growth hormone 1 Neighboring gene sodium voltage-gated channel alpha subunit 4 Neighboring gene proline rich 29 Neighboring gene intercellular adhesion molecule 2

Markers

Homology

Clone Names

  • MGC108607

Gene Ontology Provided by RGD

Function Evidence Code Pubs
transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
B cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
B cell receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
B cell receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
B cell receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
B cell receptor complex ISO
Inferred from Sequence Orthology
more info
 
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome IEA
Inferred from Electronic Annotation
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane TAS
Traceable Author Statement
more info
PubMed 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
B-cell antigen receptor complex-associated protein beta chain
Names
CD79B antigen
Cd79b molecule, immunoglobulin-associated beta
immunoglobulin-associated beta

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133533.2NP_598217.1  B-cell antigen receptor complex-associated protein beta chain precursor

    See identical proteins and their annotated locations for NP_598217.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088115
    UniProtKB/TrEMBL
    O70153
    Related
    ENSRNOP00000015977, ENSRNOT00000015976
    Conserved Domains (3) summary
    smart00077
    Location:192211
    ITAM; Immunoreceptor tyrosine-based activation motif
    smart00410
    Location:61141
    IG_like; Immunoglobulin like
    pfam07686
    Location:43141
    V-set; Immunoglobulin V-set domain

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005109.4 Reference Rnor_6.0 Primary Assembly

    Range
    94497445..94500591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000078.1 Alternate Rn_Celera

    Range
    89914837..89917983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)