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Sumo2 small ubiquitin-like modifier 2 [ Mus musculus (house mouse) ]

Gene ID: 170930, updated on 28-May-2016
Official Symbol
Sumo2provided by MGI
Official Full Name
small ubiquitin-like modifier 2provided by MGI
Primary source
MGI:MGI:2158813
See related
Ensembl:ENSMUSG00000020738 Vega:OTTMUSG00000003474
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Smt3A; Smt3b; SUMO-2; Smt3h2
Orthologs
Location:
11; 11 E2
Exon count:
4
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 11 NC_000077.6 (115523109..115536230, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (115384423..115397544, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein L39 pseudogene Neighboring gene hematological and neurological expressed sequence 1 Neighboring gene nucleoporin 85 Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 3

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
SUMO transferase activity IDA
Inferred from Direct Assay
more info
PubMed 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
protein tag IBA
Inferred from Biological aspect of Ancestor
more info
 
retinoid X receptor binding ISO
Inferred from Sequence Orthology
more info
 
ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cellular protein localization ISO
Inferred from Sequence Orthology
more info
 
negative regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
positive regulation of proteasomal ubiquitin-dependent protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of protein sumoylation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription from RNA polymerase II promoter IGI
Inferred from Genetic Interaction
more info
PubMed 
protein sumoylation IDA
Inferred from Direct Assay
more info
PubMed 
protein sumoylation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
PML body ISO
Inferred from Sequence Orthology
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
small ubiquitin-related modifier 2
Names
SMT3 homolog 2
SMT3 suppressor of mif two 3 homolog 2
SMT3 supressor of mif two 3 homolog 2
sentrin-2
ubiquitin-like protein SMT3A
ubiquitin-like protein SMT3B

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133354.2NP_579932.1  small ubiquitin-related modifier 2 precursor

    See identical proteins and their annotated locations for NP_579932.1

    Status: PROVISIONAL

    Source sequence(s)
    AK012619
    Consensus CDS
    CCDS36374.1
    UniProtKB/Swiss-Prot
    P61957
    Related
    ENSMUSP00000115044, OTTMUSP00000003569, ENSMUST00000153892, OTTMUST00000007409
    Conserved Domains (2) summary
    cd01763
    Location:793
    Sumo; Small ubiquitin-related modifier (SUMO)
    smart00213
    Location:1886
    UBQ; Ubiquitin homologues

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p3 C57BL/6J

    Range
    115523109..115536230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000033.1 Alternate Mm_Celera

    Range
    127289555..127301143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)