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Hpcal4 hippocalcin-like 4 [ Mus musculus (house mouse) ]

Gene ID: 170638, updated on 8-May-2016
Official Symbol
Hpcal4provided by MGI
Official Full Name
hippocalcin-like 4provided by MGI
Primary source
MGI:MGI:2157521
See related
Ensembl:ENSMUSG00000046093 Vega:OTTMUSG00000008935
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
NVP-2; AI846570
Orthologs
Location:
4; 4 D2.2
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 4 NC_000070.6 (123183504..123194699)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (122860747..122871942)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 8b Neighboring gene 3-oxoacid CoA transferase 2B Neighboring gene peptidylprolyl isomerase E (cyclophilin E) Neighboring gene 5'-nucleotidase, cytosolic IA Neighboring gene hairy/enhancer-of-split related with YRPW motif-like

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium channel regulator activity ISO
Inferred from Sequence Orthology
more info
 
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein C-terminus binding ISO
Inferred from Sequence Orthology
more info
 
protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
intracellular ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
hippocalcin-like protein 4
Names
neural visinin-like protein 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174998.4NP_778163.1  hippocalcin-like protein 4

    See identical proteins and their annotated locations for NP_778163.1

    Status: PROVISIONAL

    Source sequence(s)
    AL606934
    Consensus CDS
    CCDS18611.1
    UniProtKB/Swiss-Prot
    Q8BGZ1
    UniProtKB/TrEMBL
    B2RRY8
    Related
    ENSMUSP00000051487, OTTMUSP00000009309, ENSMUST00000059667, OTTMUST00000020294
    Conserved Domains (2) summary
    COG5126
    Location:13181
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd00051
    Location:65125
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p3 C57BL/6J

    Range
    123183504..123194699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000026.1 Alternate Mm_Celera

    Range
    121515883..121527080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)