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COCSUDRAFT_13968 SIR2-family protein HDAC1 [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17043515, updated on 28-Dec-2023

Summary

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Gene symbol
COCSUDRAFT_13968
Gene description
SIR2-family protein HDAC1
Locus tag
COCSUDRAFT_13968
Gene type
protein coding
RNA name
SIR2-family protein HDAC1
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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Genomic context

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Exon count:
8

NW_005178039.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ribosomal protein L27 component of cytosolic 80S ribosome and 60S large subunit Neighboring gene hypothetical protein Neighboring gene Metallo-hydrolase/oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178039.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
SIR2-family protein HDAC1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178039.1 Reference assembly

    Range
    2578508..2580556
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005650000.1 → XP_005650057.1  SIR2-family protein HDAC1 [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005650057.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0Z4E4
    Conserved Domains (1) summary
    cd01410
    Location:48 → 253
    SIRT7; SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent ...
Nucleotide Protein
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