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Lmnb1 lamin B1 [ Mus musculus (house mouse) ]

Gene ID: 16906, updated on 8-May-2016
Official Symbol
Lmnb1provided by MGI
Official Full Name
lamin B1provided by MGI
Primary source
MGI:MGI:96795
See related
Ensembl:ENSMUSG00000024590 Vega:OTTMUSG00000016318
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
Location:
18 D3; 18 30.84 cM
Exon count:
11
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 18 NC_000084.6 (56707813..56753424)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (56867467..56913078)

Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 41738 Neighboring gene predicted gene, 41737 Neighboring gene membrane-associated ring finger (C3HC4) 3 Neighboring gene predicted gene 15345 Neighboring gene predicted gene, 41740

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
JUN kinase binding NAS
Non-traceable Author Statement
more info
PubMed 
phospholipase binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural molecule activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
intermediate filament IEA
Inferred from Electronic Annotation
more info
 
lamin filament IDA
Inferred from Direct Assay
more info
PubMed 
membrane ISO
Inferred from Sequence Orthology
more info
 
nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
nuclear envelope ISO
Inferred from Sequence Orthology
more info
 
nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear lamina ISO
Inferred from Sequence Orthology
more info
 
nuclear matrix IDA
Inferred from Direct Assay
more info
PubMed 
nuclear matrix ISO
Inferred from Sequence Orthology
more info
 
nuclear membrane ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010721.2NP_034851.2  lamin-B1

    See identical proteins and their annotated locations for NP_034851.2

    Status: VALIDATED

    Source sequence(s)
    AK132252, BC052729
    Consensus CDS
    CCDS29261.1
    UniProtKB/Swiss-Prot
    P14733
    Related
    ENSMUSP00000025486, OTTMUSP00000017522, ENSMUST00000025486, OTTMUST00000039218
    Conserved Domains (2) summary
    pfam00038
    Location:32388
    Filament; Intermediate filament protein
    pfam00932
    Location:440550
    LTD; Lamin Tail Domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000084.6 Reference GRCm38.p3 C57BL/6J

    Range
    56707813..56753424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000040.1 Alternate Mm_Celera

    Range
    58016751..58063869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)