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Rpsa ribosomal protein SA [ Mus musculus (house mouse) ]

Gene ID: 16785, updated on 8-May-2016
Official Symbol
Rpsaprovided by MGI
Official Full Name
ribosomal protein SAprovided by MGI
Primary source
MGI:MGI:105381
See related
Ensembl:ENSMUSG00000032518
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MLR; P40; 67lr; Lamr; 67kDa; Lamr1; P40-3; P40-8; Lamrl1; AL022858
Orthologs
Location:
9 F4; 9 71.41 cM
Exon count:
7
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 9 NC_000075.6 (120127766..120132369)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (120036884..120041487)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene chemokine (C-C motif) receptor 8 Neighboring gene solute carrier family 25, member 38 Neighboring gene small nucleolar RNA, H/ACA box 62 Neighboring gene predicted gene 5922 Neighboring gene myelin-associated oligodendrocytic basic protein Neighboring gene predicted gene, 40583 Neighboring gene predicted gene, 38642

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

  • Homologs of the Rpsa gene: The Rpsa gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs from Annotation Pipeline: 173 organisms have orthologs with human gene Rpsa
  • Map Viewer (Human, Rat)

Clone Names

  • MGC117921, MGC118614

Gene Ontology Provided by MGI

Function Evidence Code Pubs
laminin binding IDA
Inferred from Direct Assay
more info
PubMed 
laminin receptor activity IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
ribosome binding ISO
Inferred from Sequence Orthology
more info
 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
 
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
 
rRNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
single organismal cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
translation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
90S preribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
basement membrane ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytosol ISO
Inferred from Sequence Orthology
more info
 
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
extracellular matrix ISO
Inferred from Sequence Orthology
more info
 
intracellular IEA
Inferred from Electronic Annotation
more info
 
intracellular ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
PubMed 
neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 
small ribosomal subunit IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
40S ribosomal protein SA
Names
37 kDa laminin receptor
37 kDa oncofetal antigen
37/67 kDa laminin receptor
37LRP
67 kDa laminin receptor
67LR
LBP/p40
LRP/LR
OFA/iLRP
P40-3, functional
P40-8, functional
lamR
laminin receptor 1 (67kD, ribosomal protein SA)
laminin-binding protein precursor p40

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011029.4NP_035159.3  40S ribosomal protein SA

    See identical proteins and their annotated locations for NP_035159.3

    Status: VALIDATED

    Source sequence(s)
    AK011043, AK082935, AV586849, BC081461
    Consensus CDS
    CCDS23623.1
    UniProtKB/Swiss-Prot
    P14206
    Related
    ENSMUSP00000035105, ENSMUST00000035105
    Conserved Domains (2) summary
    cd01425
    Location:18184
    RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
    PTZ00254
    Location:1250
    PTZ00254; 40S ribosomal protein SA; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p3 C57BL/6J

    Range
    120127766..120132369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000031.1 Alternate Mm_Celera

    Range
    120596577..120601180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)