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    DES desmin [ Homo sapiens (human) ]

    Gene ID: 1674, updated on 16-May-2013
    Official Symbol
    DESprovided by HGNC
    Official Full Name
    desminprovided by HGNC
    Primary source
    HGNC:2770
    See related
    Ensembl:ENSG00000175084; HPRD:00514; MIM:125660; Vega:OTTHUMG00000058924
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CSM1; CSM2
    Summary
    This gene encodes a muscle-specific class III intermediate filament. Homopolymers of this protein form a stable intracytoplasmic filamentous network connecting myofibrils to each other and to the plasma membrane. Mutations in this gene are associated with desmin-related myopathy, a familial cardiac and skeletal myopathy (CSM), and with distal myopathies. [provided by RefSeq, Jul 2008]
    Location :
    2q35
    Sequence :
    Chromosome: 2; NC_000002.11 (220283099..220291461)

    Chromosome 2 - NC_000002.11Genomic Context describing neighboring genes Neighboring gene regulated endocrine-specific protein 18 Neighboring gene aspartyl aminopeptidase Neighboring gene SPEG complex locus Neighboring gene CAVP-target protein-like

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Dilated cardiomyopathy 1F

    Summary from GeneReviews: Dilated Cardiomyopathy Overview Go to GeneReviews

    Disease Characteristics
    Nonsyndromic isolated dilated cardiomyopathy (DCM) is characterized by left ventricular enlargement and systolic dysfunction, a reduction in the myocardial force of contraction. DCM usually presents with any one of the following: Heart failure with symptoms of congestion (edema, orthopnea, paroxysmal dyspnea) and/or reduced cardiac output (fatigue, dyspnea on exertion). Arrhythmias and/or conduction system disease. Thromboembolic disease (from left ventricular mural thrombus) including stroke .
    Diagnosis Testing
    Genetic forms of DCM must be distinguished from other identifiable causes. After exclusion of all identifiable non-genetic causes, DCM is traditionally referred to as idiopathic dilated cardiomyopathy. When two or more closely related family members meet a formal diagnostic standard for idiopathic dilated cardiomyopathy, the diagnosis of familial dilated cardiomyopathy (FDC) is made. The genetic forms of DCM are diagnosed by family history and molecular genetic testing available in clinical laboratories.
    Genetic Counseling
    Genetic DCM can be inherited in an autosomal dominant, autosomal recessive, or X-linked manner. Maternal mitochondrial inheritance has also been reported; however, mitochondrial forms of DCM, although highly variable in presentation (including mild adult-onset forms), are usually syndromic and thus outside the scope of this review. Genetic counseling and risk assessment depend on determination of the specific DCM subtype in an individual.
    References

    Summary from GeneReviews: Limb-Girdle Muscular Dystrophy Overview Go to GeneReviews

    Disease Characteristics
    Limb-girdle muscular dystrophy (LGMD) is a purely descriptive term, generally reserved for childhood- or adult-onset muscular dystrophies that are distinct from the much more common X-linked dystrophinopathies. LGMDs are typically nonsyndromic, with clinical involvement typically limited to skeletal muscle. Individuals with LGMD generally show weakness and wasting restricted to the limb musculature, proximal greater than distal, and muscle degeneration/regeneration on muscle biopsy. Most individuals with LGMD show relative sparing of the bulbar muscles, although exceptions occur, depending on the genetic subtype. Onset, progression, and distribution of the weakness and wasting vary considerably among individuals and genetic subtypes.
    Diagnosis Testing
    The limb-girdle muscular dystrophies typically show degeneration/regeneration (dystrophic changes) on muscle biopsy, which is usually associated with elevated serum creatine kinase concentration. For any male or female suspected of having limb-girdle muscular dystrophy, it is necessary to first rule out an X-linked dystrophinopathy. Biochemical testing (i.e., protein testing by immunostaining or immunblotting) performed on a muscle biopsy can establish the diagnosis of the following LGMD types: sarcoglycanopathy, calpainopathy, dysferlinopathy, and O-linked glycosylation defects (also known as dystroglycanopathy). In some cases, demonstration of complete or partial deficiencies for any particular protein can then be followed by mutation studies of the corresponding gene. Molecular genetic testing for most genes in which mutations have been identified to cause LGMD is available on a clinical basis.
    Genetic Counseling
    The term LGMD1 (including, e.g., LGMD1A, LGMD1B) refers to genetic types showing dominant inheritance, whereas LGMD2 refers to types with autosomal recessive inheritance. Mutations at more than 50 loci have been reported, making accurate diagnosis and genetic counseling a challenge. In most instances, the proband represents a simplex case, and the families can be counseled for recurrence risks associated with rare autosomal recessive conditions, which leaves a "significant" risk only for the sibs of the proband. Prenatal diagnosis for many forms of limb-girdle muscular dystrophy is available for families in which the causative mutations have already been identified.
    References

    Dilated cardiomyopathy 1I

    Summary from GeneReviews: Dilated Cardiomyopathy Overview Go to GeneReviews

    Disease Characteristics
    Nonsyndromic isolated dilated cardiomyopathy (DCM) is characterized by left ventricular enlargement and systolic dysfunction, a reduction in the myocardial force of contraction. DCM usually presents with any one of the following: Heart failure with symptoms of congestion (edema, orthopnea, paroxysmal dyspnea) and/or reduced cardiac output (fatigue, dyspnea on exertion). Arrhythmias and/or conduction system disease. Thromboembolic disease (from left ventricular mural thrombus) including stroke .
    Diagnosis Testing
    Genetic forms of DCM must be distinguished from other identifiable causes. After exclusion of all identifiable non-genetic causes, DCM is traditionally referred to as idiopathic dilated cardiomyopathy. When two or more closely related family members meet a formal diagnostic standard for idiopathic dilated cardiomyopathy, the diagnosis of familial dilated cardiomyopathy (FDC) is made. The genetic forms of DCM are diagnosed by family history and molecular genetic testing available in clinical laboratories.
    Genetic Counseling
    Genetic DCM can be inherited in an autosomal dominant, autosomal recessive, or X-linked manner. Maternal mitochondrial inheritance has also been reported; however, mitochondrial forms of DCM, although highly variable in presentation (including mild adult-onset forms), are usually syndromic and thus outside the scope of this review. Genetic counseling and risk assessment depend on determination of the specific DCM subtype in an individual.
    References

    Myofibrillar myopathy 1

    Summary from GeneReviews: Myofibrillar Myopathy Go to GeneReviews

    Disease Characteristics
    Myofibrillar myopathy is characterized by slowly progressive weakness that can involve both proximal and distal muscles. Distal muscle weakness is present in about 80% of individuals and is more pronounced than proximal weakness in about 25%. A minority of individuals experience sensory symptoms, muscle stiffness, aching, or cramps. Peripheral neuropathy is present in about 20% of affected individuals. Overt cardiomyopathy is present in 15%-30%.
    Diagnosis Testing
    The diagnosis of myofibrillar myopathy is based on clinical findings, electromyography (EMG), nerve conduction studies, and, most importantly, muscle histology. To date, the genetic basis of myofibrillar myopathy has been elucidated in only about 50% of cases. Mutations have been identified in DES, the gene encoding desmin; CRYAB, encoding alpha-crystallin B chain; MYOT, encoding myotilin; LDB3 (ZASP), encoding LIM domain-binding protein 3; FLNC, encoding filamin-C, and BAG3, encoding BAG family molecular chaperone regulator 3. Molecular genetic testing of six genes is clinically available. Recently, mutations in FHL1, encoding four and a half LIM domains protein 1, and DNAJB6, encoding DnaJ homolog subfamily B member 6 were also identified.
    Genetic Counseling
    Myofibrillar myopathy is most commonly inherited in an autosomal dominant manner. Exceptions include: x-linked inheritance of FHL1 mutations and autosomal recessive inheritance of CRYAB frameshift mutations that lead to premature termination of the translational chain resulting in non-transcription of the mutant protein. The inheritance in some families cannot be determined with confidence. When the disease-causing mutation in the family is known, carrier testing and prenatal testing for pregnancies at increased risk may be available.
    References

    Primary dilated cardiomyopathy

    Summary from GeneReviews: Dilated Cardiomyopathy Overview Go to GeneReviews

    Disease Characteristics
    Nonsyndromic isolated dilated cardiomyopathy (DCM) is characterized by left ventricular enlargement and systolic dysfunction, a reduction in the myocardial force of contraction. DCM usually presents with any one of the following: Heart failure with symptoms of congestion (edema, orthopnea, paroxysmal dyspnea) and/or reduced cardiac output (fatigue, dyspnea on exertion). Arrhythmias and/or conduction system disease. Thromboembolic disease (from left ventricular mural thrombus) including stroke .
    Diagnosis Testing
    Genetic forms of DCM must be distinguished from other identifiable causes. After exclusion of all identifiable non-genetic causes, DCM is traditionally referred to as idiopathic dilated cardiomyopathy. When two or more closely related family members meet a formal diagnostic standard for idiopathic dilated cardiomyopathy, the diagnosis of familial dilated cardiomyopathy (FDC) is made. The genetic forms of DCM are diagnosed by family history and molecular genetic testing available in clinical laboratories.
    Genetic Counseling
    Genetic DCM can be inherited in an autosomal dominant, autosomal recessive, or X-linked manner. Maternal mitochondrial inheritance has also been reported; however, mitochondrial forms of DCM, although highly variable in presentation (including mild adult-onset forms), are usually syndromic and thus outside the scope of this review. Genetic counseling and risk assessment depend on determination of the specific DCM subtype in an individual.
    References
    Protein Gene Interaction Pubs
    pol gag-pol HIV-1 protease cleaves the intermediate filament proteins vimentin, desmin, and glial fibrillary acidic protein in vitro PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    NP_001918.3 NP_005177.2 CAPN1    BIND  PubMed CAPN1 interacts with DES. 
    P17661 Q96GD4 AURKB    HPRD  PubMed  
    P17661 P07384 CAPN1    HPRD  PubMed  
    P17661 P15924 DSP    HPRD  PubMed  
    P17661 P20929 NEB    HPRD  PubMed  
    P17661 P98161 PKD1    HPRD  PubMed  
    P17661 Q13464 ROCK1    HPRD  PubMed  
    P17661 P23297 S100A1    HPRD  PubMed  
    P17661 P04271 S100B    HPRD  PubMed  
    P17661 P04278 SHBG    HPRD  PubMed  
    P17661 Q13813 SPTAN1    HPRD  PubMed  
    P17661 Syncoilin intermediate filament 1 SYNC    HPRD  PubMed  
    P17661 O15061 SYNM    HPRD  PubMed  
    P17661 Q9C029 TRIM7    HPRD  PubMed  
    BioGRID:108038 BioGRID:114646 AURKB    BioGRID  PubMed Biochemical Activity 
    BioGRID:108038 BioGRID:115825 CCT7    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:107800 CRYAB    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108038 BioGRID:108166 DSP    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:108038 BioGRID:109282 HADHB    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:116281 HNRNPUL1    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:610599 HSP90AA5P    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:112351 ITSN1    BioGRID  PubMed Two-hybrid 
    BioGRID:108038 BioGRID:109931 JUP    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:110438 MLH1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:108038 BioGRID:110721 MYL6    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:1173200 NEB    BioGRID  PubMed Two-hybrid 
    BioGRID:108038 BioGRID:110783 NEB    BioGRID  PubMed Two-hybrid 
    BioGRID:108038 BioGRID:119982 PLEKHA5    BioGRID  PubMed Two-hybrid 
    BioGRID:108038 BioGRID:112059 RPL17    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:112078 RPL29    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:112179 S100A1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108038 BioGRID:112359 SHBG    BioGRID  PubMed Two-hybrid 
    BioGRID:108038 BioGRID:112509 SNRNP70    BioGRID  PubMed Co-fractionation 
    BioGRID:108038 BioGRID:112550 SP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108038 BioGRID:112587 SPTAN1    BioGRID  PubMed Co-purification 
    BioGRID:108038 BioGRID:123502 SYNC    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:108038 BioGRID:116923 SYNM    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108038 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Reconstituted Complex 
    BioGRID:108038 BioGRID:115791 UBD    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108038 BioGRID:116168 YWHAQ    BioGRID  PubMed Affinity Capture-MS 
    • Arrhythmogenic right ventricular cardiomyopathy, organism-specific biosystem (from WikiPathways)
      Arrhythmogenic right ventricular cardiomyopathy, organism-specific biosystemAdapted from KEGG: http://www.genome.jp/kegg/pathway/hsa/hsa05412.html
    • Arrhythmogenic right ventricular cardiomyopathy (ARVC), organism-specific biosystem (from KEGG)
      Arrhythmogenic right ventricular cardiomyopathy (ARVC), organism-specific biosystemArrhythmogenic right ventricular cardiomyopathy (ARVC) is an inherited heart muscle disease that may result in arrhythmia, heart failure, and sudden death. The hallmark pathological findings are prog...
    • Arrhythmogenic right ventricular cardiomyopathy (ARVC), conserved biosystem (from KEGG)
      Arrhythmogenic right ventricular cardiomyopathy (ARVC), conserved biosystemArrhythmogenic right ventricular cardiomyopathy (ARVC) is an inherited heart muscle disease that may result in arrhythmia, heart failure, and sudden death. The hallmark pathological findings are prog...
    • Aurora B signaling, organism-specific biosystem (from Pathway Interaction Database)
      Aurora B signaling, organism-specific biosystem
      Aurora B signaling
    • Dilated cardiomyopathy, organism-specific biosystem (from KEGG)
      Dilated cardiomyopathy, organism-specific biosystemDilated cardiomyopathy (DCM) is a heart muscle disease characterised by dilation and impaired contraction of the left or both ventricles that results in progressive heart failure and sudden cardiac d...
    • Dilated cardiomyopathy, conserved biosystem (from KEGG)
      Dilated cardiomyopathy, conserved biosystemDilated cardiomyopathy (DCM) is a heart muscle disease characterised by dilation and impaired contraction of the left or both ventricles that results in progressive heart failure and sudden cardiac d...
    • Hypertrophic cardiomyopathy (HCM), organism-specific biosystem (from KEGG)
      Hypertrophic cardiomyopathy (HCM), organism-specific biosystemHypertrophic cardiomyopathy (HCM) is a primary myocardial disorder with an autosomal dominant pattern of inheritance that is characterized by hypertrophy of the left ventricles with histological feat...
    • Hypertrophic cardiomyopathy (HCM), conserved biosystem (from KEGG)
      Hypertrophic cardiomyopathy (HCM), conserved biosystemHypertrophic cardiomyopathy (HCM) is a primary myocardial disorder with an autosomal dominant pattern of inheritance that is characterized by hypertrophy of the left ventricles with histological feat...
    • Muscle contraction, organism-specific biosystem (from REACTOME)
      Muscle contraction, organism-specific biosystemIn this module, the processes by which calcium binding triggers actin - myosin interactions and force generation in smooth and striated muscle tissues are annotated.
    • Striated Muscle Contraction, organism-specific biosystem (from WikiPathways)
      Striated Muscle Contraction, organism-specific biosystemMuscle contraction is the process where muscle tissue is activated by a signal from the nervous system. In case of voluntary action the nervous signals are initiated from the brain by so called actio...
    • Striated Muscle Contraction, organism-specific biosystem (from REACTOME)
      Striated Muscle Contraction, organism-specific biosystemStriated muscle contraction is a process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry, or in short, increased force being exerted on the tendons....

    Markers

    Homology

    Clone Names

    • FLJ12025, FLJ39719, FLJ41013, FLJ41793

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    cytoskeletal protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    structural constituent of cytoskeleton TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    cytoskeleton organization TAS
    Traceable Author Statement
    more info
    PubMed 
    muscle contraction TAS
    Traceable Author Statement
    more info
    PubMed 
    muscle filament sliding TAS
    Traceable Author Statement
    more info
     
    regulation of heart contraction TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    Z disc IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol TAS
    Traceable Author Statement
    more info
     
    fascia adherens IEA
    Inferred from Electronic Annotation
    more info
     
    intermediate filament IEA
    Inferred from Electronic Annotation
    more info
     
    neuromuscular junction IEA
    Inferred from Electronic Annotation
    more info
     
    sarcolemma IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    desmin
    Names
    desmin
    intermediate filament protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008043.1 RefSeqGene

      Range
      5001..13363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001927.3NP_001918.3  desmin

      Status: REVIEWED

      Source sequence(s)
      AL541778, BC010072, BC032116, BQ941246
      Consensus CDS
      CCDS33383.1
      UniProtKB/Swiss-Prot
      P17661
      UniProtKB/TrEMBL
      Q53SB5
      Related
      ENSP00000363071, OTTHUMP00000064865, ENST00000373960, OTTHUMT00000130240
      Conserved Domains (2) summary
      pfam04732
      Location:77106
      Blast Score: 112
      Filament_head; Intermediate filament head (DNA binding) region
      pfam00038
      Location:107415
      Blast Score: 861
      Filament; Intermediate filament protein

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000002.11 Reference GRCh37.p10 Primary Assembly

      Range
      220283099..220291461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000134.1 Alternate HuRef

      Range
      212136136..212144500
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018913.1 Alternate CHM1_1.0

      Range
      219663611..219671973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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