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Klf9 Kruppel-like factor 9 [ Mus musculus (house mouse) ]

Gene ID: 16601, updated on 8-May-2016
Official Symbol
Klf9provided by MGI
Official Full Name
Kruppel-like factor 9provided by MGI
Primary source
MGI:MGI:1333856
See related
Ensembl:ENSMUSG00000033863
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Bteb1; BTEB-1; Gm9971; AA589643; 2310051E17Rik; ENSMUSG00000055440
Orthologs
Location:
19; 19 C1
Exon count:
2
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (23141226..23166911)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (23215716..23241401)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA C330002G04 gene Neighboring gene uncharacterized LOC102636896 Neighboring gene microRNA 1192 Neighboring gene structural maintenance of chromosomes 5 Neighboring gene predicted gene, 33950

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
RNA polymerase II regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
cellular response to cortisol stimulus ISO
Inferred from Sequence Orthology
more info
 
cellular response to thyroid hormone stimulus ISO
Inferred from Sequence Orthology
more info
 
embryo implantation IDA
Inferred from Direct Assay
more info
PubMed 
negative regulation of keratinocyte proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
progesterone receptor signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
regulation of transcription, DNA-templated IDA
Inferred from Direct Assay
more info
PubMed 
rhythmic process IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
Krueppel-like factor 9
Names
BTE-binding protein 1
GC-box-binding protein 1
basic transcription element binding protein 1
basic transcription element-binding protein 1
transcription factor BTEB1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010638.4NP_034768.2  Krueppel-like factor 9

    See identical proteins and their annotated locations for NP_034768.2

    Status: PROVISIONAL

    Source sequence(s)
    AC121973
    Consensus CDS
    CCDS29706.1
    UniProtKB/TrEMBL
    Q8CEC4
    Related
    ENSMUSP00000045639, ENSMUST00000036884
    Conserved Domains (3) summary
    COG5048
    Location:78234
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:189212
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:145167
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

    Range
    23141226..23166911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000041.1 Alternate Mm_Celera

    Range
    23874123..23899734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)