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ZNF567 zinc finger protein 567 [ Homo sapiens (human) ]

Gene ID: 163081, updated on 26-May-2016
Official Symbol
ZNF567provided by HGNC
Official Full Name
zinc finger protein 567provided by HGNC
Primary source
HGNC:HGNC:28696
See related
Ensembl:ENSG00000189042 HPRD:11728; Vega:OTTHUMG00000180898
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
19q13.12
Exon count:
11
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 19 NC_000019.10 (36687564..36723358)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (37178466..37212428)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 461 Neighboring gene uncharacterized LOC105372391 Neighboring gene long intergenic non-protein coding RNA 1534 Neighboring gene zinc finger protein 850 Neighboring gene uncharacterized LOC728485

  • Gene Expression, organism-specific biosystem (from REACTOME)
    Gene Expression, organism-specific biosystemGene Expression covers the pathways by which genomic DNA is transcribed to yield RNA, the regulation of these transcription processes, and the pathways by which newly-made RNA Transcripts are process...
  • Generic Transcription Pathway, organism-specific biosystem (from REACTOME)
    Generic Transcription Pathway, organism-specific biosystemOVERVIEW OF TRANSCRIPTION REGULATION: Detailed studies of gene transcription regulation in a wide variety of eukaryotic systems has revealed the general principles and mechanisms by which cell- or t...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC45586

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
transcription factor activity, sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
transcription regulatory region DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
negative regulation of transcription from RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
positive regulation of transcription from RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001300979.1NP_001287908.1  zinc finger protein 567 isoform 1

    See identical proteins and their annotated locations for NP_001287908.1

    Status: VALIDATED

    Source sequence(s)
    AA742659, AK303326, AK313647, BC033849, BF209248, HY089322
    Consensus CDS
    CCDS74349.1
    UniProtKB/Swiss-Prot
    Q8N184
    UniProtKB/TrEMBL
    B2R956, B4E0D0
    Related
    ENSP00000441838, OTTHUMP00000265619, ENST00000536254, OTTHUMT00000453549
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. NM_001322911.1NP_001309840.1  zinc finger protein 567 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AA742659, AK313647, BC033849, BF209248, BG253190
  3. NM_001322912.1NP_001309841.1  zinc finger protein 567 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC074138
  4. NM_001322913.1NP_001309842.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  5. NM_001322914.1NP_001309843.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  6. NM_001322915.1NP_001309844.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  7. NM_001322916.1NP_001309845.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  8. NM_001322917.1NP_001309846.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  9. NM_001322918.1NP_001309847.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  10. NM_001322919.1NP_001309848.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  11. NM_001322920.1NP_001309849.1  zinc finger protein 567 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC074138
  12. NM_152603.4NP_689816.2  zinc finger protein 567 isoform 2

    See identical proteins and their annotated locations for NP_689816.2

    Status: VALIDATED

    Source sequence(s)
    AA742659, AC074138, BC033849, BF209248
    Consensus CDS
    CCDS12495.1
    UniProtKB/Swiss-Prot
    Q8N184
    Related
    ENSP00000353957, OTTHUMP00000265620, ENST00000360729, OTTHUMT00000453551
    Conserved Domains (4) summary
    smart00349
    Location:235
    KRAB; krueppel associated box
    COG5048
    Location:248596
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:320345
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:532552
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p2 Primary Assembly

    Range
    36687564..36723358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011526576.1XP_011524878.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. XM_011526582.1XP_011524884.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (4) summary
    smart00349
    Location:235
    KRAB; krueppel associated box
    COG5048
    Location:248596
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:320345
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:532552
    ZF_C2H2; C2H2 Zn finger [structural motif]
  3. XM_011526578.1XP_011524880.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  4. XM_011526583.1XP_011524885.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (4) summary
    smart00349
    Location:235
    KRAB; krueppel associated box
    COG5048
    Location:248596
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:320345
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:532552
    ZF_C2H2; C2H2 Zn finger [structural motif]
  5. XM_011526577.1XP_011524879.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  6. XM_011526579.1XP_011524881.1  

    See identical proteins and their annotated locations for XP_011524881.1

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  7. XM_011526580.1XP_011524882.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  8. XM_011526581.1XP_011524883.1  

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (5) summary
    cd07765
    Location:644
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:666
    KRAB; krueppel associated box
    COG5048
    Location:279627
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:351376
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:563583
    ZF_C2H2; C2H2 Zn finger [structural motif]
  9. XM_011526585.1XP_011524887.1  

    UniProtKB/TrEMBL
    F8WEL6
    Related
    ENSP00000467712, OTTHUMP00000265621, ENST00000588311, OTTHUMT00000453552
    Conserved Domains (4) summary
    smart00349
    Location:235
    KRAB; krueppel associated box
    COG5048
    Location:248580
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:320345
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:504524
    ZF_C2H2; C2H2 Zn finger [structural motif]
  10. XM_011526584.1XP_011524886.1  

    See identical proteins and their annotated locations for XP_011524886.1

    UniProtKB/Swiss-Prot
    Q8N184
    Conserved Domains (4) summary
    smart00349
    Location:235
    KRAB; krueppel associated box
    COG5048
    Location:248596
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:320345
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:532552
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate CHM1_1.1

Genomic

  1. NC_018930.2 Alternate CHM1_1.1

    Range
    37179060..37212794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)