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ZNF579 zinc finger protein 579 [ Homo sapiens (human) ]

Gene ID: 163033, updated on 8-May-2016
Official Symbol
ZNF579provided by HGNC
Official Full Name
zinc finger protein 579provided by HGNC
Primary source
HGNC:HGNC:26646
See related
Ensembl:ENSG00000218891 HPRD:11730
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
19q13.42
Exon count:
2
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 19 NC_000019.10 (55577523..55580899, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (56088891..56092211, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene SH3 domain binding kinase family member 3 Neighboring gene uncharacterized LOC105372463 Neighboring gene FLT3 interacting zinc finger 1 Neighboring gene zinc finger protein 524

NHGRI GWAS Catalog

Description
Genome-wide association study of chronic periodontitis in a general German population.
NHGRI GWA Catalog

Protein interactions

Protein Gene Interaction Pubs
Tat tat HIV-1 Tat is identified to have a physical interaction with zinc finger protein 579 (ZNF579) in human HEK293 and/or Jurkat cell lines by using affinity tagging and purification mass spectrometry analyses PubMed

Go to the HIV-1, Human Interaction Database

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ35453

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152600.2NP_689813.2  zinc finger protein 579

    See identical proteins and their annotated locations for NP_689813.2

    Status: VALIDATED

    Source sequence(s)
    AK092772, AW003562, CN340494, CX781546
    Consensus CDS
    CCDS12927.1
    UniProtKB/Swiss-Prot
    Q8NAF0
    Related
    ENSP00000320188, OTTHUMP00000265511, ENST00000325421, OTTHUMT00000453348
    Conserved Domains (3) summary
    COG5048
    Location:70119
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:5883
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:386406
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p2 Primary Assembly

    Range
    55577523..55580899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011526573.1XP_011524875.1  

    See identical proteins and their annotated locations for XP_011524875.1

    UniProtKB/Swiss-Prot
    Q8NAF0
    Conserved Domains (3) summary
    COG5048
    Location:70119
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:5883
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:386406
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate CHM1_1.1

Genomic

  1. NC_018930.2 Alternate CHM1_1.1

    Range
    56082565..56085885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)