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    DCC deleted in colorectal carcinoma [ Homo sapiens ]

    Gene ID: 1630, updated on 19-May-2012

    Summary

    Official Symbol
    DCCprovided by HGNC
    Official Full Name
    deleted in colorectal carcinomaprovided by HGNC
    Primary source
    HGNC:2701
    See related
    Ensembl:ENSG00000187323; HPRD:00391; MIM:120470; Vega:OTTHUMG00000132698
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CRC18; CRCR1; IGDCC1
    Summary
    This gene encodes a netrin 1 receptor. The transmembrane protein is a member of the immunoglobulin superfamily of cell adhesion molecules, and mediates axon guidance of neuronal growth cones towards sources of netrin 1 ligand. The cytoplasmic tail interacts with the tyrosine kinases Src and focal adhesion kinase (FAK, also known as PTK2) to mediate axon attraction. The protein partially localizes to lipid rafts, and induces apoptosis in the absence of ligand. The protein functions as a tumor suppressor, and is frequently mutated or downregulated in colorectal cancer and esophageal carcinoma. [provided by RefSeq, Oct 2009]

    Genomic context

    Location :
    18q21.3
    Sequence :
    Chromosome: 18; NC_000018.9 (49866542..51062273)

    Chromosome 18 - NC_000018.9Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 57 homolog (Chlamydomonas) pseudogene Neighboring gene ribosomal protein S8 pseudogene 3 Neighboring gene vomeronasal 1 receptor 76 pseudogene Neighboring gene ribosomal protein L29 pseudogene 32 Neighboring gene small nucleolar RNA, H/ACA box 37 Neighboring gene methyl-CpG binding domain protein 2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NP_005206.1 FYN    BIND  PubMed DCC interacts with Fyn. 
    NP_005206.1 PTK2    BIND  PubMed FAK interacts with DCC. 
    NP_005206.1 PTK2    BIND  PubMed DCC interacts with FAK. 
    NP_005206.1 NP_003022.2 SIAH1    BIND  PubMed DCC interacts with Siah-1. 
    NP_005206.1 NP_003022.2 SIAH1    BIND  PubMed hSiah1 interacts with DCC cytoplasmic domain. 
    NP_005206.1 NP_005058.3 SIAH2    BIND  PubMed DCC interacts with Siah-2. 
    NP_005206.1 NP_005058.3 SIAH2    BIND  PubMed hSiah2 interacts with DCC. 
    P43146 P29275 ADORA2B    HPRD  PubMed  
    P43146 Q9UKG1 APPL1    HPRD  PubMed  
    P43146 P42574 CASP3    HPRD  PubMed  
    P43146 P55211 CASP9    HPRD  PubMed  
    P43146 P27361 MAPK3    HPRD  PubMed  
    P43146 P56270 MAZ    HPRD  PubMed  
    P43146 P16333 NCK1    HPRD  PubMed  
    P43146 O95631 NTN1    HPRD  PubMed  
    P43146 Q00169 PITPNA    HPRD  PubMed  
    P43146 Q05397 PTK2    HPRD  PubMed  
    P43146 Q8IUQ4 SIAH1    HPRD  PubMed  
    P43146 O43255 SIAH2    HPRD  PubMed  
    BioGRID:107998 BioGRID:117522 APPL1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:107998 BioGRID:106862 AR    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:107998 BioGRID:107286 CASP3    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:107998 BioGRID:107292 CASP9    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107998 BioGRID:108284 EIF1AX    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:123822 EIF2A    BioGRID  PubMed Co-fractionation 
    BioGRID:107998 BioGRID:108286 EIF2B1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:114409 EIF2B2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:114407 EIF2B4    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:114411 EIF2S2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:108287 EIF2S3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:109857 EIF3E    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:108292 EIF4E    BioGRID  PubMed Affinity Capture-Western; Co-fractionation 
    BioGRID:107998 BioGRID:130428 EIF4E3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:121162 EIF5A2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:113271 EZR    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:111580 MAPK1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:111581 MAPK3    BioGRID  PubMed Two-hybrid 
    BioGRID:107998 BioGRID:110320 MAZ    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:107998 BioGRID:110770 NCK1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107998 BioGRID:114816 NTN1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107998 BioGRID:111719 PTK2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:107998 BioGRID:108480 PTK2B    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107998 BioGRID:110813 RPL10A    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112057 RPL13    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:114752 RPL23    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112077 RPL28    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112088 RPL38    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112045 RPL5    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Co-fractionation; Far Western 
    BioGRID:107998 BioGRID:112118 RPS10    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112121 RPS13    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112143 RPS24    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107998 BioGRID:112105 RPS4X    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107998 BioGRID:112108 RPS6    BioGRID  PubMed Co-fractionation 
    BioGRID:107998 BioGRID:112372 SIAH1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107998 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-Western 

    General gene information

    Markers

    Homology

    Pathways from BioSystems

    • Apoptosis, organism-specific biosystem (from REACTOME)
      Apoptosis, organism-specific biosystemApoptosis is a distinct form of cell death that is functionally and morphologically different from necrosis. Nuclear chromatin condensation, cytoplasmic shrinking, dilated endoplasmic reticulum, and ...
    • Axon guidance, organism-specific biosystem (from KEGG)
      Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, conserved biosystem (from KEGG)
      Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, organism-specific biosystem (from REACTOME)
      Axon guidance, organism-specific biosystemAxon guidance / axon pathfinding is the process by which neurons send out axons to reach the correct targets. Growing axons have a highly motile structure at the growing tip called the growth cone, w...
    • Cell-Cell communication, organism-specific biosystem (from REACTOME)
      Cell-Cell communication, organism-specific biosystemCell-to-Cell communication is crucial for multicellular organisms because it allows organisms to coordinate the activity of their cells. Some cell-to-cell communication requires direct cell-cell cont...
    • Colorectal cancer, organism-specific biosystem (from KEGG)
      Colorectal cancer, organism-specific biosystemColorectal cancer (CRC) is the second largest cause of cancer-related deaths in Western countries. CRC arises from the colorectal epithelium as a result of the accumulation of genetic alterations in ...
    • Colorectal cancer, conserved biosystem (from KEGG)
      Colorectal cancer, conserved biosystemColorectal cancer (CRC) is the second largest cause of cancer-related deaths in Western countries. CRC arises from the colorectal epithelium as a result of the accumulation of genetic alterations in ...
    • DCC mediated attractive signaling, organism-specific biosystem (from REACTOME)
      DCC mediated attractive signaling, organism-specific biosystemThe DCC family includes DCC and neogenin in vertebrates. DCC is required for netrin-induced axon attraction. DCC is a transmembrane protein lacking any identifiable catalytic activity. Protein tyrosi...
    • DSCAM interactions, organism-specific biosystem (from REACTOME)
      DSCAM interactions, organism-specific biosystemDSCAM (Down syndrome cell adhesion molecule) is one of the members of the Ig superfamily CAMs with a domain architecture comprising 10 Ig domains, 6 fibronectin type III (FN) repeats, a single transm...
    • Developmental Biology, organism-specific biosystem (from REACTOME)
      Developmental Biology, organism-specific biosystemAs a first step towards capturing the array of processes by which a fertilized egg gives rise to the diverse tissues of the body, examples of three kinds of processes have been annotated. These are a...
    • Netrin mediated repulsion signals, organism-specific biosystem (from REACTOME)
      Netrin mediated repulsion signals, organism-specific biosystemUnc5 netrin receptors mediate repellent responses to netrin. Four Unc5 members have been found in humans: Unc5A, B, C and D. Different studies have suggested that long-range repulsion to netrin requi...
    • Netrin-1 signaling, organism-specific biosystem (from REACTOME)
      Netrin-1 signaling, organism-specific biosystemNetrins are secreted proteins that play a crucial role in neuronal migration and in axon guidance during the development of the nervous system. To date, several Netrins have been described in mouse a...
    • Pathways in cancer, organism-specific biosystem (from KEGG)
      Pathways in cancer, organism-specific biosystem
      Pathways in cancer
    • Regulation of Apoptosis, organism-specific biosystem (from REACTOME)
      Regulation of Apoptosis, organism-specific biosystemA regulated balance between cell survival and apoptosis is essential for normal development and homeostasis of multicellular organisms (see Matsuzawa, 2001). Defects in control of this balance may...
    • Role of DCC in regulating apoptosis, organism-specific biosystem (from REACTOME)
      Role of DCC in regulating apoptosis, organism-specific biosystemIn the presence of Netrin1, DCC and UNC5 generate attractive and repulsive signals to growing axons. In the absence of Netrin-1, DCC induces cell death signaling initiated via caspase cleavage of DCC...
    • Role of second messengers in netrin-1 signaling, organism-specific biosystem (from REACTOME)
      Role of second messengers in netrin-1 signaling, organism-specific biosystemThe levels of second messengers such as Ca+2, cAMP and cGMP may regulate the response of the growth cone to a particular cue. Netrin-1 as a guidance molecule depends on intracellular Ca+2 concentrati...

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    netrin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
     
    receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
     
    transmembrane signaling receptor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    apoptotic process TAS
    Traceable Author Statement
    more info
     
    axon guidance TAS
    Traceable Author Statement
    more info
     
    axonogenesis TAS
    Traceable Author Statement
    more info
    PubMed 
    induction of apoptosis TAS
    Traceable Author Statement
    more info
    PubMed 
    multicellular organismal development IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of collateral sprouting TAS
    Traceable Author Statement
    more info
    PubMed 
    negative regulation of dendrite development TAS
    Traceable Author Statement
    more info
    PubMed 
    negative regulation of neuron projection development TAS
    Traceable Author Statement
    more info
    PubMed 
    positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of neuron projection development IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of apoptotic process TAS
    Traceable Author Statement
    more info
     
    response to amphetamine IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytosol TAS
    Traceable Author Statement
    more info
     
    growth cone membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral to membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane raft IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    netrin receptor DCC
    Names
    netrin receptor DCC
    colorectal tumor suppressor
    colorectal cancer suppressor
    tumor suppressor protein DCC
    deleted in colorectal cancer protein
    immunoglobulin superfamily DCC subclass member 1
    immunoglobulin superfamily, DCC subclass, member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_013341.1 RefSeqGene

      Range
      5001..1200732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_005215.3NP_005206.2  netrin receptor DCC

      Status: REVIEWED

      Source sequence(s)
      AC011155, AC103949, BC036524, X76132
      Consensus CDS
      CCDS11952.1
      UniProtKB/Swiss-Prot
      P43146
      UniProtKB/TrEMBL
      Q49AK4
      Related
      ENSP00000389140, OTTHUMP00000163551, ENST00000442544, OTTHUMT00000255996
      Conserved Domains (7) summary
      cd00063
      Location:429521
      Blast Score: 175
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:157222
      Blast Score: 141
      Ig; Immunoglobulin domain
      cd05722
      Location:41136
      Blast Score: 424
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      pfam06583
      Location:11461445
      Blast Score: 960
      Neogenin_C; Neogenin C-terminus
      pfam07679
      Location:331417
      Blast Score: 216
      I-set; Immunoglobulin I-set domain
      cl00065
      Location:726805
      Blast Score: 105
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl11960
      Location:347417
      Blast Score: 317
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000018.9 Reference GRCh37.p5 Primary Assembly

      Range
      49866542..51062273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000150.1 Alternate HuRef

      Range
      46722887..47917133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC011155.13 None
    genomic AC016383.11 None
    genomic AC019239.5 (18894..165590) None
    genomic AC021486.10 None
    genomic AC027248.9 None
    genomic AC078999.4 None
    genomic AC090660.3 (102991..195155) None
    genomic AC100777.2 None
    genomic AC103949.6 (2516..135355) None
    genomic AC110591.7 None
    genomic AC116002.5 None
    genomic CH471096.1 EAW62991.1
      EAW62992.1
      EAW62993.1
      EAW62994.1
    genomic M32286.1 AAA52174.1
    genomic M32288.1 AAA52175.1
    genomic M32290.1 AAA52176.1
    genomic M63696.1 AAA52177.1
    genomic M63698.1 AAA52181.1
    genomic M63700.1 AAA52178.1
    genomic M63702.1 AAA52179.1
    genomic M63718.1 AAA52180.1
    genomic S73204.1 AAB31484.2
    mRNA AK302643.1 BAG63884.1
    mRNA AK310385.1 None
    mRNA AW949550.1 None
    mRNA BC036524.1 AAH36524.1
    mRNA M32292.1 AAA35751.1
    mRNA X76132.1 CAA53735.1
    other-genetic BC152808.1 AAI52809.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    P43146.2 GenPept UniProtKB/Swiss-Prot:P43146
    Q16218 GenPept UniProtKB/TrEMBL:Q16218
    Q49AK4 GenPept UniProtKB/TrEMBL:Q49AK4

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