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Icam2 intercellular adhesion molecule 2 [ Mus musculus (house mouse) ]

Gene ID: 15896, updated on 28-May-2016
Official Symbol
Icam2provided by MGI
Official Full Name
intercellular adhesion molecule 2provided by MGI
Primary source
MGI:MGI:96394
See related
Ensembl:ENSMUSG00000001029 Vega:OTTMUSG00000003420
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CD102; Ly-60; Icam-2
Orthologs
Location:
11 E1; 11 69.09 cM
Exon count:
7
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 11 NC_000077.6 (106377656..106388122, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (106238970..106243955, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene CD79B antigen Neighboring gene sodium channel, voltage-gated, type IV, alpha Neighboring gene proline rich 29 Neighboring gene endoplasmic reticulum (ER) to nucleus signalling 1 Neighboring gene small nucleolar RNA, C/D box 104 Neighboring gene predicted gene, 36220

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
integrin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
integrin binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
cell adhesion IBA
Inferred from Biological aspect of Ancestor
more info
 
single organismal cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell periphery IDA
Inferred from Direct Assay
more info
PubMed 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
membrane ISO
Inferred from Sequence Orthology
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
uropod IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
intercellular adhesion molecule 2
Names
lymphocyte function-associated AG-1 counter-receptor

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010494.1NP_034624.1  intercellular adhesion molecule 2 precursor

    See identical proteins and their annotated locations for NP_034624.1

    Status: PROVISIONAL

    Source sequence(s)
    X65493
    Consensus CDS
    CCDS25555.1
    UniProtKB/Swiss-Prot
    P35330
    Related
    ENSMUSP00000001055, OTTMUSP00000003460, ENSMUST00000001055, OTTMUST00000007199
    Conserved Domains (2) summary
    pfam03921
    Location:22109
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    cl11960
    Location:112200
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p3 C57BL/6J

    Range
    106377656..106388122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006532303.1XP_006532366.1  

    See identical proteins and their annotated locations for XP_006532366.1

    UniProtKB/Swiss-Prot
    P35330
    Conserved Domains (2) summary
    pfam03921
    Location:22109
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    cl11960
    Location:112200
    Ig; Immunoglobulin domain
  2. XM_011248762.1XP_011247064.1  

    See identical proteins and their annotated locations for XP_011247064.1

    Conserved Domains (2) summary
    pfam03921
    Location:58145
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    cl11960
    Location:148236
    Ig; Immunoglobulin domain
  3. XM_011248763.1XP_011247065.1  

    See identical proteins and their annotated locations for XP_011247065.1

    Conserved Domains (2) summary
    pfam03921
    Location:58145
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    cl11960
    Location:148236
    Ig; Immunoglobulin domain
  4. XM_011248761.1XP_011247063.1  

    See identical proteins and their annotated locations for XP_011247063.1

    Conserved Domains (2) summary
    pfam03921
    Location:58145
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    cl11960
    Location:148236
    Ig; Immunoglobulin domain

Alternate Mm_Celera

Genomic

  1. AC_000033.1 Alternate Mm_Celera

    Range
    118108995..118113998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)