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TEVgp1 polyprotein [ Tobacco etch virus ]

Gene ID: 1502321, updated on 26-Jun-2015
Gene symbol
TEVgp1
Gene description
polyprotein
Locus tag
TEVgp1
Gene type
protein coding
RNA name
viral mRNA
RefSeq status
REVIEWED
Organism
Tobacco etch virus
Lineage
Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; Potyvirus
Sequence:
NC_001555.1 (1..9494)

NC_001555.1Genomic Context describing neighboring genes Neighboring gene PIPO

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Names
polyprotein
6K2 protein
NIa-VPg protein
NIb protein
coat protein
P1 protein
HC-Pro protein
P3 protein
6K1 protein
CI protein
NIa-Pro protein

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001555.1 Reference assembly

    Range
    1..9494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_062908.1 polyprotein [Tobacco etch virus]

    See identical proteins and their annotated locations for NP_062908.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P04517
    Conserved Domains (13) summary
    pfam08440
    Location:123
    Poty_PP; Potyviridae polyprotein
    cd01699
    Location:147417
    RNA_dep_RNAP; RNA_dep_RNAP: RNA-dependent RNA polymerase (RdRp) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage. RdRp catalyzes synthesis of the RNA strand complementary to a given RNA template. RdRps of many viruses are ...
    pfam00767
    Location:27263
    Poty_coat; Potyvirus coat protein
    pfam01577
    Location:74303
    Peptidase_S30; Potyvirus P1 protease
    pfam00851
    Location:8459
    Peptidase_C6; Helper component proteinase
    pfam13608
    Location:11347
    Potyvirid-P3; Protein P3 of Potyviral polyprotein
    pfam13608
    Location:151
    Potyvirid-P3; Protein P3 of Potyviral polyprotein
    pfam08440
    Location:384633
    Poty_PP; Potyviridae polyprotein
    smart00490
    Location:261359
    HELICc; helicase superfamily c-terminal domain
    smart00487
    Location:78220
    DEXDc; DEAD-like helicases superfamily
    cd00046
    Location:78205
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam13608
    Location:155
    Potyvirid-P3; Protein P3 of Potyviral polyprotein
    pfam00863
    Location:1232
    Peptidase_C4; Peptidase family C4