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Tsc22d3 TSC22 domain family, member 3 [ Mus musculus (house mouse) ]

Gene ID: 14605, updated on 21-May-2016
Official Symbol
Tsc22d3provided by MGI
Official Full Name
TSC22 domain family, member 3provided by MGI
Primary source
MGI:MGI:1196284
See related
Ensembl:ENSMUSG00000031431 Vega:OTTMUSG00000018845
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
DIP; Gilz; Dsip1; Tilz3; TSC-22R
Orthologs
Location:
X; X F1
Exon count:
11
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) X NC_000086.7 (140539528..140600522, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (137074067..137135061, complement)

Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene phosphoribosyl pyrophosphate synthetase 1 Neighboring gene predicted gene, 39538 Neighboring gene midline 2 Neighboring gene eukaryotic translation initiation factor 2C, 5

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
MRF binding IPI
Inferred from Physical Interaction
more info
PubMed 
transcription factor activity, sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
transcription factor activity, sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
TSC22 domain family protein 3
Names
TSC22-related inducible leucine zipper 3
delta sleep inducing peptide, immunoreactor
glucocorticoid-induced leucine zipper protein
long glucocorticoid-induced leucine zipper protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077364.1NP_001070832.1  TSC22 domain family protein 3 isoform 1

    See identical proteins and their annotated locations for NP_001070832.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
    Source sequence(s)
    AF201289, AL683809
    Consensus CDS
    CCDS41150.1
    UniProtKB/Swiss-Prot
    Q9Z2S7
    Related
    ENSMUSP00000108620, OTTMUSP00000020406, ENSMUST00000112996, OTTMUST00000045354
    Conserved Domains (1) summary
    pfam01166
    Location:122178
    TSC22; TSC-22/dip/bun family
  2. NM_010286.4NP_034416.3  TSC22 domain family protein 3 isoform 2

    See identical proteins and their annotated locations for NP_034416.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has a different 5' structure, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1.
    Source sequence(s)
    AK083389, AL683809
    Consensus CDS
    CCDS30440.1
    UniProtKB/Swiss-Prot
    Q9Z2S7
    Related
    ENSMUSP00000062589, OTTMUSP00000020403, ENSMUST00000055738, OTTMUST00000045349
    Conserved Domains (1) summary
    pfam01166
    Location:58114
    TSC22; TSC-22/dip/bun family

RNA

  1. NR_122039.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) has a different 5' structure compared to variant 1. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
    Source sequence(s)
    AK083389, AL683809, BY071907
    Related
    ENSMUST00000112995

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000086.7 Reference GRCm38.p3 C57BL/6J

    Range
    140539528..140600522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006528504.2XP_006528567.1  

    See identical proteins and their annotated locations for XP_006528567.1

    UniProtKB/Swiss-Prot
    Q9Z2S7
    Conserved Domains (1) summary
    pfam01166
    Location:122178
    TSC22; TSC-22/dip/bun family
  2. XM_006528499.2XP_006528562.1  

    See identical proteins and their annotated locations for XP_006528562.1

    UniProtKB/Swiss-Prot
    Q9Z2S7
    Conserved Domains (1) summary
    pfam01166
    Location:122178
    TSC22; TSC-22/dip/bun family
  3. XM_006528500.2XP_006528563.1  

    See identical proteins and their annotated locations for XP_006528563.1

    UniProtKB/Swiss-Prot
    Q9Z2S7
    Conserved Domains (1) summary
    pfam01166
    Location:122178
    TSC22; TSC-22/dip/bun family
  4. XM_006528505.2XP_006528568.1  

    See identical proteins and their annotated locations for XP_006528568.1

    UniProtKB/Swiss-Prot
    Q9Z2S7
    Conserved Domains (1) summary
    pfam01166
    Location:122178
    TSC22; TSC-22/dip/bun family
  5. XM_006528501.2XP_006528564.1  

    See identical proteins and their annotated locations for XP_006528564.1

    UniProtKB/Swiss-Prot
    Q9Z2S7
    Conserved Domains (1) summary
    pfam01166
    Location:58114
    TSC22; TSC-22/dip/bun family
  6. XM_006528503.2XP_006528566.1  

    See identical proteins and their annotated locations for XP_006528566.1

    UniProtKB/Swiss-Prot
    Q9Z2S7
    Conserved Domains (1) summary
    pfam01166
    Location:157
    TSC22; TSC-22/dip/bun family

Alternate Mm_Celera

Genomic

  1. AC_000042.1 Alternate Mm_Celera

    Range
    123798019..123859465 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)