U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

VNG_RS13080 TATA-box-binding protein [ Halobacterium salinarum NRC-1 ]

Gene ID: 1446945, updated on 31-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
VNG_RS13080
Gene description
TATA-box-binding protein
Locus tag
VNG_RS13080
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG7171
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
plasmid: pNRC100
Sequence:
NC_001869.1 (182950..183510)

NC_001869.1Genomic Context describing neighboring genes Neighboring gene cytochrome d ubiquinol oxidase subunit II Neighboring gene cytochrome ubiquinol oxidase subunit I Neighboring gene hypothetical protein Neighboring gene PadR family transcriptional regulator Neighboring gene DNA-binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001869.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Pfeiffer F, et al. Life (Basel), 2015 Jun 2. PMID 26042526, Free PMC Article
  2. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
TATA-box-binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001869.1 Reference assembly

    Range
    182950..183510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010890411.1 MULTISPECIES: TATA-box-binding protein [Halobacterium]

    See identical proteins and their annotated locations for WP_010890411.1

    UniProtKB/Swiss-Prot
    Q48325
    UniProtKB/TrEMBL
    A0A510N9W1, A0A6A9SEE5
    Conserved Domains (1) summary
    COG2101
    Location:1 → 185
    SPT15; TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q48325.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.