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1: CSK c-src tyrosine kinase [ Homo sapiens ]

GeneID: 1445 updated 10-Dec-2009

[Top][Help]Summary

Official Symbol
CSKprovided by HGNC
Official Full Name
c-src tyrosine kinaseprovided by HGNC
Primary Source
HGNC:2444
See related
Ensembl:ENSG00000103653; HPRD:00496; MIM:124095
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MGC117393; CSK

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 15; Location: 15q23-q25See CSK in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. Results indicate that Wnt5a/Ror2 signaling involves the activation of a SFK, leading to MMP-13 expression, and that constitutively active Wnt5a/Ror2 signaling confers invasive properties on osteosarcoma cells in a cell-autonomous manner.
PubMed 2. The structural and conformational changes upon phosphorylation were monitored through chemical shift perturbations and residual dipolar couplings, indicating that modifications occur at local level and no global rearrangements were apparent.
PubMed 3. Observational study of gene-disease association. (HuGE Navigator)
PubMed 4. Insulin promotes the interaction of Hsp90 with the IP(3)R to dampen its Ca(2+) release activity by a complex mechanism involving mammalian target of rapamycin and the Src kinase.
PubMed 5. Oncogenic potential of c-Src tyrosine kinase is controled by lipid rafts. (review)
PubMed 6. A comparative sequence analysis of cDNAs for Csk tyrosine kinase of normal lymphocytes and lymphocytes of patients with choroidal melanoma revealed a nucleotide substitution in dexon 10 of the gene, which appears to be of diagnostic significance
PubMed 7. activated Src within the nucleus of ER-positive tumours predicts an improved outcome. In ER/PgR-positive disease
PubMed 8. Absolute requirement for c-Src in villin-induced regulation of cell migration of intestinal tumor cells.
PubMed 9. Csk serves to maintain the constancy of baseline excitatory synaptic transmission by inhibiting Src kinase-dependent synaptic plasticity in the hippocampus
PubMed 10. Small interference RNAs specific for Csk, was identified that reproducibly reduce viral RNA and viral protein levels in hepatitis C virus replicon-bearing cells
PubMed 11. PRL3 has a role in the gene-specific translational control of Csk expression
PubMed 12. Neph1 but not nephrin specifically binds to adaptor protein Grb2 and tyrosine kinase Csk in a phosphorylation-dependent manner.
PubMed 13. Collectively, our experiments implicate a novel signaling pathway involving calpain 2, PTP1B, and Src in the regulation of invadopodia and breast cancer invasion.
PubMed 14. c-Src is recruited by AF-6 to cell-cell contact sites, suggesting that c-Src is regulated by a PDZ protein in special cellular locations.
PubMed 15. C terminus of c-Src via its Gly-Glu-Asn-Leu sequence presents a mechanism that restricts c-Src in epithelia and prevents progression toward an invasive phenotype
PubMed 16. The interaction of c-Src with LNX1 depends on the C-terminal PDZ ligand of c-Src.
PubMed 17. Thus, these results suggest that endogenous c-Src, c-Yes, and Lyn are differentially activated through Cdc2 activation during M phase.
PubMed 18. A full-length encoding cDNA of the tyrosine kinase csk gene of human lymphocytes was cloned.
PubMed 19. These results demonstrate that the chimeric strategy is useful for detailed dissection of the mechanistic basis of substrate specificity and regulation of protein tyrosine kinases.
PubMed 20. Csk is activated by increase of p140Cap which leads to inhibition of Src and downstream signalling as well as of cell motility and invasion
PubMed 21. functions of the activation loop in phosphorylation of its physiological substrate Src probed by extensive site-specific mutagenesis and kinetic studies
PubMed 22. this study reveals a mechanism by which Src family kinases may control PDGF-mediated responses both at transcriptional and translational levels.
PubMed 23. Csk tyrosine kinase interacts with G3BP, a new player in T-cell-antigen receptor signaling, which reduces the amount of Csk in the immune synapse.
PubMed 24. Csk Phe183 stabilizes the movement of the alphaC-helix of the protein tyrosine kinase
PubMed 25. Study shows EGF-stimulation-induced Csk-binding protein (Cbp) tyrosine phosphorylation followed by Cbp-Csk association, in a SFK-dependent manner.[Csk-binding protein]
PubMed 26. Tyrosine kinase c-Src constitutes a bridge between cystic fibrosis transmembrane regulator channel failure and MUC1 overexpression in cystic fibrosis
PubMed 27. Upon platelet interaction with fibrinogen, cholesterol accumulated at the tips of filopodia and at the leading edge of spreading cells; cholesterol-rich raft aggregation was accompanied by concentration of c-Src and CD63 in these cell domains
PubMed 28. model of substrate-docking site which provides the structural basis of substrate specificity in Csk
PubMed 29. NMR and site-directed mutagenesis reveal novel mechanism of enzyme regulation
PubMed 30. Csk achieves a low K(m) for the substrate Src, not by stabilizing protein-protein interactions but rather by facilitating a fast phosphoryl transfer step
PubMed 31. High c-Src activityis associated with ductal carcinoma in situ with high risk of recurrence or progression to invasive breast cancer.
PubMed 32. in more advanced stages of colorectal carcinogenesis, increases in c-Src levels and activity are likely to have functions other than the direct promotion of tumor growth
PubMed 33. striking functional differences between the Csk and Chk SH2 domains
PubMed 34. These data implicate an important role of c-Src in phosphorylating RelA/p65 to promote the transcriptional activity of NF-kappaB and thereby ICAM-1 expression in endothelial cells.
PubMed 35. in Caco-2 cells oxidative stress-induced disruption of tight junction is mediated by the activation of c-Src.
PubMed 36. Csk suppression is an important early event in colorectal cancer pathogenesis.
PubMed 37. C-terminal Src kinase is regulated by the leukocyte inhibitory receptor CD85j
PubMed 38. c-Src may act as a global regulator of early proinflammatory host responses to group D adenovirus Ad19 infection of the human cornea, such as early IL-8 gene transcription.
PubMed 39. These data demonstrate that LPXN forms a signaling complex with Pyk2, c-Src, and PTP-PEST to regulate migration of prostate cancer cells.
PubMed 40. identification between c-Src and diacylglycerol kinase-zeta
PubMed 41. c-Src is a novel localization and binding partner for histone deacetylase (HDAC) 3 and is implicated in HDAC3 regulation.
PubMed 42. c-Src tyrosine kinase is activated by dsRNA in human monocyte-derived dendritic cells, is recruited to TLR3 in a double-stranded (ds)RNA-dependent manner, and plays a central role in antiviral immunity.
PubMed 43. steps involving Src association, phosphorylation, and product release are fast, and a structural change in Csk participates in limiting the catalytic cycle
PubMed 44. The data indicate that reversible cross-linking of two cysteine residues in the SH2 domain greatly impacts catalytic function and interdomain communication in Csk.
PubMed 45. these observations support the hypothesis that there is a specific coordination between the activation of the cytosolic Ah receptor and the c-Src- and cdc37-containing HSP90 complex.
PubMed 46. study elucidated a nongenomic extranuclear signal mediated by the RAR-SRC interaction that is negatively regulated by CSK and is required for RA-induced neuronal differentiation
PubMed 47. Regulation of an ERG K+ current by Src tyrosine kinase.
PubMed 48. cAMP regulates Csk via both spatial and enzymatic mechanisms, thereby inhibiting signaling through the T-cell receptor
PubMed 49. activation of Csk and GSK-3beta by Galphaq may contribute to the physiological and pathological effects of Gq-coupled receptors
PubMed 50. c-Src plays a critical role in IL-1-induced NF-kappa B activation through the IKK complex.
PubMed 51. The SH2 domain moves in a cantilever fashion with respect to the small lobe of the kinase domain, ordering the active site for catalysis. Binding of a small Cbp-derived peptide to the SH2 domain of Csk modifies these motions, enhancing Src recognition.
PubMed 52. activation by adaptor protein Shc
PubMed 53. c-Src has been identified as the tyrosine kinase involved in TNF-alpha-inducing NF-kappa B transcriptional activation in the in vitro induction of COX-2 promoter activity.
PubMed 54. beta3 integrin alters TGF-beta signaling in mammary epithelial cells via Src-mediated TbetaR-II tyrosine phosphorylation, which significantly enhanced the ability of TGF-beta to induce epithelial to mesenchymal transition and invasion.
PubMed 55. These results suggest that dimerization of Src plays an important role in the regulation of Src tyrosine kinase activity.
PubMed 56. role of elevated Src in human colon cancer cells is to modulate integrin-dependent cell-matrix attachment and formation of adhesion structures.
PubMed 57. analysis of docking-based substrate recognition by the catalytic domain of Csk
PubMed 58. EG-1 may be involved in signaling pathways including c-Src activation.

[Top][Help]HIV-1 protein interactions

Protein    Interaction
1. Tat HIV-1 Tat stimulates the tyrosine phosphorylation and activation of c-Src kinase resulting in the activation of the intrinsic kinase activity of c-Src, an effect associated with Tat-induced angiogenesis and Kaposi's sarcoma PubMed

Go to the HIV-1, Human Protein Interaction Database

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  Csk   NP_079148.1   DOK3      HPRD    PubMed
 
  NP_004374.1   Beta arrestin 1   ARRB1      HPRD    PubMed
 
  NP_004374.1   Caveolin 1   CAV1      HPRD    PubMed
 
  NP_004374.1   CBL   CBL      HPRD    PubMed
 
  NP_004374.1   T-cell antigen receptor, zeta   CD247      HPRD    PubMed
 
  NP_004374.1   NP_000601.2   CD44      HPRD    PubMed
CDH5 (VE-cadherin) interacts with CSK.
  NP_004374.1   NP_001786.1   CDH5      BIND    PubMed
 
  NP_004374.1   CREBBP   CREBBP      HPRD    PubMed
CSK autophosphorylates. This interaction was modeled on a demonstrated interaction using CSK from an unspecified species.
  NP_004374.1   NP_004374.1   CSK      BIND    PubMed
 
  NP_004374.1   DAB2   DAB2      HPRD    PubMed
 
  NP_004374.1   Fyn   FYN      HPRD    PubMed
 
  NP_004374.1   Heterogeneous nuclear ribonucleoprotein K   HNRNPK      HPRD    PubMed
 
  NP_004374.1   NP_000866.1   IGF1R      HPRD    PubMed
CSK interacts with IGF-IR.
  NP_004374.1   NP_000866.1   IGF1R      BIND    PubMed
 
  NP_004374.1   NP_000199.1   INSR      HPRD    PubMed
CSK interacts with IR.
  NP_004374.1   NP_000199.1   INSR      BIND    PubMed
 
  NP_004374.1   NP_060910.2   PAG1      HPRD    PubMed
 
  NP_004374.1   CD31   PECAM1      HPRD    PubMed
 
  NP_004374.1   NP_002654.2   PLD2      HPRD    PubMed
 
  NP_004374.1   NP_005598.3   PTK2      HPRD    PubMed
 
  NP_004374.1   NP_002826.2   PTPN12      HPRD    PubMed
 
  NP_004374.1   BAA18998.1   PXN      HPRD    PubMed
 
  NP_004374.1   NP_002881.1   RASA1      HPRD    PubMed
CSK phosphorylates RGS16. This interaction was modeled on a demonstrated interaction between CSK from an unspecified species and human RSG16.
  NP_004374.1   NP_002919.2   RGS16      BIND    PubMed
 
  NP_004374.1   Syndecan 3   SDC3      HPRD    PubMed
 
  NP_004374.1   NP_892113.1   SHC1      HPRD    PubMed
 
  NP_004374.1   NP_055265.1   SIT1      HPRD    PubMed
 
  NP_004374.1   c-Src   SRC      HPRD    PubMed
 
  NP_004374.1   HSCF        HPRD    PubMed
 
  NP_004374.1   PEP        HPRD    PubMed
Affinity Capture-Western
  BioGRID:107832   BioGRID:106901   ARRB1      BioGRID    PubMed
Two-hybrid
  BioGRID:107832   BioGRID:107305   CAV1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107832   BioGRID:107315   CBL      BioGRID    PubMed
Affinity Capture-Western; Phenotypic Suppression
  BioGRID:107832   BioGRID:107777   CREBBP      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107832   BioGRID:107971   DAB2      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107832   BioGRID:107975   DAG1      BioGRID    PubMed
Affinity Capture-MS
  BioGRID:107832   BioGRID:108276   EGFR      BioGRID    PubMed
Affinity Capture-MS
  BioGRID:107832   BioGRID:108377   ERBB3      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107832   BioGRID:108810   FYN      BioGRID    PubMed
Affinity Capture-Western; Biochemical Activity
  BioGRID:107832   BioGRID:109431   HNRNPK      BioGRID    PubMed
Affinity Capture-Western; Two-hybrid
  BioGRID:107832   BioGRID:109701   IGF1R      BioGRID    PubMed
Two-hybrid
  BioGRID:107832   BioGRID:109854   INSR      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107832   BioGRID:120931   PAG1      BioGRID    PubMed
Biochemical Activity
  BioGRID:107832   BioGRID:111201   PECAM1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107832   BioGRID:111719   PTK2      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107832   BioGRID:111787   PXN      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107832   BioGRID:111856   RASA1      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107832   BioGRID:115027   SDC3      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107832   BioGRID:112361   SHC1      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107832   BioGRID:112592   SRC      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107832   BioGRID:112899   TGFB1I1      BioGRID    PubMed
Affinity Capture-Western; Biochemical Activity
  BioGRID:107832   BioGRID:124871   YTHDC1      BioGRID    PubMed

[Top][Help]General gene information

Markers

RH77839(e-PCR)
Links: UniSTS:67364
CSK_3956(e-PCR)
Links: UniSTS:462130
RH70899(e-PCR)
Links: UniSTS:77652
RH69961(e-PCR)
Links: UniSTS:26230
PMC193924P3(e-PCR)
Links: UniSTS:271765
MARC_5011-5012:991939428:1(e-PCR)
Links: UniSTS:231136
MARC_5011-5012:996690037:1(e-PCR)
Links: UniSTS:231136

Phenotypes

Genome-wide association study of blood pressure and hypertension
NHGRI GWA Catalog
Genome-wide association study identifies eight loci associated with blood pressure
NHGRI GWA Catalog

Homology

Homologs of the CSK gene The CSK gene is conserved in chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, and C.elegans.


Map Viewer (Mouse, Rat)

Pathways

KEGG pathway: Chemokine signaling pathway
04062
KEGG pathway: Epithelial cell signaling in Helicobacter pylori infection
05120
KEGG pathway: Neurotrophin signaling pathway
04722
KEGG pathway: Regulation of actin cytoskeleton
04810
Reactome Event:Hemostasis
REACT_604
Reactome Event:Integrin cell surface interactions
REACT_13552
Reactome Event:Signaling by EGFR
REACT_9417
Reactome Event:Signaling in Immune system
REACT_6900

[Top][Help]General protein information

Preferred Names
c-src tyrosine kinase
Names
c-src tyrosine kinase
NP_001120662.1
EC 2.7.10.2
NP_004374.1
EC 2.7.10.2

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_001127190.1NP_001120662.1  c-src tyrosine kinase

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC091230,AK290531,AW575209,AY007162
    Consensus CDS
    CCDS10269.1
    UniProtKB/TrEMBL
    A8K3B6
    UniProtKB/TrEMBL
    B2R6Q4
    UniProtKB/Swiss-Prot
    P41240
    Related Ensembl
    ENSP00000220003, ENSP00000414764, ENST00000220003, ENST00000439220
    Conserved Domains (4) summary
    cd00173
    Location:81170
    Blast Score: 262
    SH2; Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2...
    cd00174
    Location:1467
    Blast Score: 150
    SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization...
    smart00219
    Location:195440
    Blast Score: 942
    TyrKc; Tyrosine kinase, catalytic domain
    cd05082
    Location:188443
    Blast Score: 1408
    PTKc_Csk; Catalytic Domain of the Protein Tyrosine Kinase, C-terminal Src kinase
  2. NM_004383.2NP_004374.1  c-src tyrosine kinase

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AW575209,BC106073
    Consensus CDS
    CCDS10269.1
    UniProtKB/TrEMBL
    B2R6Q4
    UniProtKB/Swiss-Prot
    P41240
    Related Ensembl
    ENSP00000220003, ENSP00000414764, ENST00000220003, ENST00000439220
    Conserved Domains (4) summary
    cd00173
    Location:81170
    Blast Score: 262
    SH2; Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2...
    cd00174
    Location:1467
    Blast Score: 150
    SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization...
    smart00219
    Location:195440
    Blast Score: 942
    TyrKc; Tyrosine kinase, catalytic domain
    cd05082
    Location:188443
    Blast Score: 1408
    PTKc_Csk; Catalytic Domain of the Protein Tyrosine Kinase, C-terminal Src kinase

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000015.9

    Range
    75074424..75095538
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_010194.17 

    Range
    45864981..45886095
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000058.1

    Range
    52024457..52045567
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_925907.1 

    Range
    681018..702128
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000147.1

    Range
    51872088..51892743
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838219.1 

    Range
    680979..701634
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AC091230.23  (70803..91593)   None
  genomic   CH471136.2   EAW99311.1
       EAW99312.1
  genomic   DQ075211.1   AAY57329.1
  genomic   X74765.1   CAB58562.1
  mRNA   AB451288.1   BAG70102.1
  mRNA   AB451420.1   BAG70234.1
  mRNA   AK127672.1   BAG54548.1
  mRNA   AK223626.1   BAD97346.1
  mRNA   AK290531.1   BAF83220.1
  mRNA   AK297694.1   BAG60052.1
  mRNA   AK298245.1   BAG60511.1
  mRNA   AK309344.1   None
  mRNA   AK310136.1   None
  mRNA   AK312669.1   BAG35551.1
  mRNA   AW575209.1   None
  mRNA   AY007162.1   None
  mRNA   BC104847.1   AAI04848.1
  mRNA   BC104875.1   AAI04876.1
  mRNA   BC106073.1   AAI06074.1
  mRNA   CR541960.1   CAG46758.1
  mRNA   CR620625.1   None
  mRNA   X59932.1   CAA42556.1
  mRNA   X60114.1   CAA42713.1
Protein Accession   Links
P41240.1   GenPept   UniProtKB/Swiss-Prot:P41240
Q53EL3   GenPept   UniProtKB/TrEMBL:Q53EL3

[Top][Help]Additional Links

Gene LinkOut

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