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    CSK c-src tyrosine kinase [ Homo sapiens ]

    Gene ID: 1445, updated on 19-May-2012

    Summary

    Official Symbol
    CSKprovided by HGNC
    Official Full Name
    c-src tyrosine kinaseprovided by HGNC
    Primary source
    HGNC:2444
    See related
    Ensembl:ENSG00000103653; HPRD:00496; MIM:124095; Vega:OTTHUMG00000142814
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MGC117393

    Genomic context

    Location :
    15q24.1
    Sequence :
    Chromosome: 15; NC_000015.9 (75074425..75095539)

    Chromosome 15 - NC_000015.9Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 1, subfamily A, polypeptide 1 Neighboring gene cytochrome P450, family 1, subfamily A, polypeptide 2 Neighboring gene microRNA 4513 Neighboring gene lectin, mannose-binding, 1 like Neighboring gene complexin 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    HIV-1 protein interactions

    Protein Gene Interaction Pubs
    Tat tat HIV-1 Tat stimulates the tyrosine phosphorylation and activation of c-Src kinase resulting in the activation of the intrinsic kinase activity of c-Src, an effect associated with Tat-induced angiogenesis and Kaposi's sarcoma PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NP_004374.1 NP_001786.1 CDH5    BIND  PubMed CDH5 (VE-cadherin) interacts with CSK. 
    NP_004374.1 NP_004374.1 CSK    BIND  PubMed CSK autophosphorylates. This interaction was modeled on a demonstrated interaction using CSK from an unspecified species. 
    NP_004374.1 NP_000866.1 IGF1R    BIND  PubMed CSK interacts with IGF-IR. 
    NP_004374.1 NP_000199.1 INSR    BIND  PubMed CSK interacts with IR. 
    NP_004374.1 NP_002919.2 RGS16    BIND  PubMed CSK phosphorylates RGS16. This interaction was modeled on a demonstrated interaction between CSK from an unspecified species and human RSG16. 
    P41240 P07550 ADRB2    HPRD  PubMed  
    P41240 P49407 ARRB1    HPRD  PubMed  
    P41240 Q03135 CAV1    HPRD  PubMed  
    P41240 P20963 CD247    HPRD  PubMed  
    P41240 P16070 CD44    HPRD  PubMed  
    P41240 P33151 CDH5    HPRD  PubMed  
    P41240 Q92793 CREBBP    HPRD  PubMed  
    P41240 P41240 CSK    HPRD  PubMed  
    P41240 P98082 DAB2    HPRD  PubMed  
    P41240 Q99704 DOK1    HPRD  PubMed  
    P41240 Q7L591 DOK3    HPRD  PubMed  
    P41240 P09769 FGR    HPRD  PubMed  
    P41240 P06241 FYN    HPRD  PubMed  
    P41240 Q13283 G3BP1    HPRD  PubMed  
    P41240 P17302 GJA1    HPRD  PubMed  
    P41240 P06396 GSN    HPRD  PubMed  
    P41240 P08631 HCK    HPRD  PubMed  
    P41240 P61978 HNRNPK    HPRD  PubMed  
    P41240 P08069 IGF1R    HPRD  PubMed  
    P41240 P06213 INSR    HPRD  PubMed  
    P41240 Q6GTX8 LAIR1    HPRD  PubMed  
    P41240 P06239 LCK    HPRD  PubMed  
    P41240 P07948 LYN    HPRD  PubMed  
    P41240 Q8TD08 MAPK15    HPRD  PubMed  
    P41240 Q9NWQ8 PAG1    HPRD  PubMed  
    P41240 P16284 PECAM1    HPRD  PubMed  
    P41240 O14939 PLD2    HPRD  PubMed  
    P41240 P17612 PRKACA    HPRD  PubMed  
    P41240 Q05397 PTK2    HPRD  PubMed  
    P41240 Q05209 PTPN12    HPRD  PubMed  
    P41240 Q99952 PTPN18    HPRD  PubMed  
    P41240 Q9Y2R2 PTPN22    HPRD  PubMed  
    P41240 P49023 PXN    HPRD  PubMed  
    P41240 P20936 RASA1    HPRD  PubMed  
    P41240 O15492 RGS16    HPRD  PubMed  
    P41240 O75056 SDC3    HPRD  PubMed  
    P41240 P29353 SHC1    HPRD  PubMed  
    P41240 Q9Y3P8 SIT1    HPRD  PubMed  
    P41240 P12931 SRC    HPRD  PubMed  
    P41240 O15455 TLR3    HPRD  PubMed  
    BioGRID:107832 BioGRID:106901 ARRB1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107832 BioGRID:107305 CAV1    BioGRID  PubMed Two-hybrid 
    BioGRID:107832 BioGRID:107315 CBL    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107832 BioGRID:107777 CREBBP    BioGRID  PubMed Affinity Capture-Western; Phenotypic Suppression 
    BioGRID:107832 BioGRID:198936 Csk    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107832 BioGRID:107971 DAB2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107832 BioGRID:107975 DAG1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107832 BioGRID:108276 EGFR    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107832 BioGRID:108377 ERBB3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107832 BioGRID:108810 FYN    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107832 BioGRID:109431 HNRNPK    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:107832 BioGRID:109701 IGF1R    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:107832 BioGRID:109854 INSR    BioGRID  PubMed Two-hybrid 
    BioGRID:107832 BioGRID:109928 JUN    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Two-hybrid 
    BioGRID:107832 BioGRID:120931 PAG1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107832 BioGRID:111201 PECAM1    BioGRID  PubMed Biochemical Activity 
    BioGRID:107832 BioGRID:111719 PTK2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107832 BioGRID:111787 PXN    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107832 BioGRID:111856 RASA1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107832 BioGRID:115027 SDC3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107832 BioGRID:112361 SHC1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107832 BioGRID:112592 SRC    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107832 BioGRID:112899 TGFB1I1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107832 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107832 BioGRID:124871 YTHDC1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 

    General gene information

    Markers

    Homology

    • Homologs of the CSK gene: The CSK gene is conserved in chimpanzee, , dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, and C.elegans.
    • Map Viewer (Mouse, Rat)

    Pathways from BioSystems

    • Adaptive Immune System, organism-specific biosystem (from REACTOME)
      Adaptive Immune System, organism-specific biosystemAdaptive immunity refers to antigen-specific immune response efficiently involved in clearing the pathogens. The adaptive immune system is comprised of B and T lymphocytes that express receptors with...
    • B Cell Receptor Signaling Pathway, organism-specific biosystem (from WikiPathways)
      B Cell Receptor Signaling Pathway, organism-specific biosystemThe B cell receptor includes membrane ?? heavy chain molecules bound to a light chain and an Ig alpha (CD79A)/Ig beta (CD79B) heterodimer. Activation of the B cell receptor involves phosphorylation o...
    • BCR signaling pathway, organism-specific biosystem (from Pathway Interaction Database)
      BCR signaling pathway, organism-specific biosystem
      BCR signaling pathway
    • CXCR4-mediated signaling events, organism-specific biosystem (from Pathway Interaction Database)
      CXCR4-mediated signaling events, organism-specific biosystem
      CXCR4-mediated signaling events
    • Costimulation by the CD28 family, organism-specific biosystem (from REACTOME)
      Costimulation by the CD28 family, organism-specific biosystemOptimal activation of T-lymphocytes requires at least two signals. A primary one is delivered by the T-cell receptor (TCR) complex after antigen recognition and additional costimulatory signals are d...
    • Disease, organism-specific biosystem (from REACTOME)
      Disease, organism-specific biosystemBiological processes are captured in Reactome by identifying the molecules (DNA, RNA, protein, small molecules) involved in them and describing the details of their interactions. From this molecular ...
    • EGFR1 Signaling Pathway, organism-specific biosystem (from WikiPathways)
      EGFR1 Signaling Pathway, organism-specific biosystemThe androgen receptor is a member of the nuclear receptor family of ligand activated transcription factors. These receptors bind to steroid hormones, thyroid hormone, retinoids and vitamin D among ot...
    • Epithelial cell signaling in Helicobacter pylori infection, organism-specific biosystem (from KEGG)
      Epithelial cell signaling in Helicobacter pylori infection, organism-specific biosystemTwo major virulence factors of H. pylori are the vacuolating cytotoxin (VacA) and the cag type-IV secretion system (T4SS) and its translocated effector protein, cytotoxin-associated antigen A (CagA)....
    • Epithelial cell signaling in Helicobacter pylori infection, conserved biosystem (from KEGG)
      Epithelial cell signaling in Helicobacter pylori infection, conserved biosystemTwo major virulence factors of H. pylori are the vacuolating cytotoxin (VacA) and the cag type-IV secretion system (T4SS) and its translocated effector protein, cytotoxin-associated antigen A (CagA)....
    • GAB1 signalosome, organism-specific biosystem (from REACTOME)
      GAB1 signalosome, organism-specific biosystemGAB1 is recruited to the activated EGFR indirectly, through GRB2. GAB1 acts as an adaptor protein that enables formation of an active PIK3, through recruitment of PIK3 regulatory subunit PIK3R1 (also...
    • Hemostasis, organism-specific biosystem (from REACTOME)
      Hemostasis, organism-specific biosystemHemostasis is a physiological response that culminates in the arrest of bleeding from an injured vessel. Under normal conditions the vascular endothelium supports vasodilation, inhibits platelet adhe...
    • Immune System, organism-specific biosystem (from REACTOME)
      Immune System, organism-specific biosystemHumans are exposed to millions of potential pathogens daily, through contact, ingestion, and inhalation. Our ability to avoid infection depends on the adaptive immune system and during the first crit...
    • Integrin alphaIIb beta3 signaling, organism-specific biosystem (from REACTOME)
      Integrin alphaIIb beta3 signaling, organism-specific biosystemAt the sites of vascular injury bioactive molecules such as thrombin, ADP, collagen, fibrinogen and thrombospondin are generated, secreted or exposed. These stimuli activate platelets, converting the...
    • Integrin cell surface interactions, organism-specific biosystem (from REACTOME)
      Integrin cell surface interactions, organism-specific biosystemThe extracellular matrix (ECM) is a network of macro-molecules that underlies all epithelia and endothelia and that surrounds all connective tissue cells. This matrix provides the mechanical strength...
    • Integrin-mediated cell adhesion, organism-specific biosystem (from WikiPathways)
      Integrin-mediated cell adhesion, organism-specific biosystemIntegrins are receptors that mediate attachment between a cell and the tissues surrounding it, which may be other cells or the extracellular matrix (ECM). They also play a role in cell signaling and ...
    • PD-1 signaling, organism-specific biosystem (from REACTOME)
      PD-1 signaling, organism-specific biosystemThe Programmed cell death protein 1 (PD-1) is one of the negative regulators of TCR signaling. PD-1 may exert its effects on cell differentiation and survival directly by inhibiting early activation ...
    • PDGFR-beta signaling pathway, organism-specific biosystem (from Pathway Interaction Database)
      PDGFR-beta signaling pathway, organism-specific biosystem
      PDGFR-beta signaling pathway
    • Phosphorylation of CD3 and TCR zeta chains, organism-specific biosystem (from REACTOME)
      Phosphorylation of CD3 and TCR zeta chains, organism-specific biosystemPrior to T cell receptor (TCR) stimulation, CD4/CD8 associated Lck remains seperated from the TCR and is maintained in an inactive state by the action of Csk. Csk phosphorylates the negative regulato...
    • Platelet Aggregation (Plug Formation), organism-specific biosystem (from REACTOME)
      Platelet Aggregation (Plug Formation), organism-specific biosystemThe tethering of platelets to the site of vascular injury is the first step in the formation of a platelet thrombus. Firm adhesion of these tethered platelets, as well as the additional recruitment o...
    • Platelet activation, signaling and aggregation, organism-specific biosystem (from REACTOME)
      Platelet activation, signaling and aggregation, organism-specific biosystemPlatelet activation begins with the initial binding of adhesive ligands and of the excitatory platelet agonists (released or generated at the sites of vascular trauma) to cognate receptors on the pla...
    • Regulation of Actin Cytoskeleton, organism-specific biosystem (from WikiPathways)
      Regulation of Actin Cytoskeleton, organism-specific biosystem
      Regulation of Actin Cytoskeleton
    • Signal Transduction, organism-specific biosystem (from REACTOME)
      Signal Transduction, organism-specific biosystemSignal transduction is a process in which extracellular signals elicit changes in cell state and activity. Transmembrane receptors sense changes in the cellular environment by binding ligands, such a...
    • Signaling by EGFR, organism-specific biosystem (from REACTOME)
      Signaling by EGFR, organism-specific biosystemThe epidermal growth factor receptor (EGFR) is one member of the ERBB family of transmembrane glycoprotein tyrosine receptor kinases (RTK). Binding of EGFR to its ligands induces conformational chang...
    • Signaling by EGFR in Cancer, organism-specific biosystem (from REACTOME)
      Signaling by EGFR in Cancer, organism-specific biosystemThe pathway "Signaling by EGFR in Cancer" shows "Signaling by constitutively active EGFR" in parallel with "Signaling by EGFR". This allows users to compare signaling by constitutively active EGFR ca...
    • Signaling events mediated by PTP1B, organism-specific biosystem (from Pathway Interaction Database)
      Signaling events mediated by PTP1B, organism-specific biosystem
      Signaling events mediated by PTP1B
    • TCR signaling, organism-specific biosystem (from REACTOME)
      TCR signaling, organism-specific biosystemThe TCR is a multisubunit complex that consists of clonotypic alpha/beta chains noncovalently associated with the invariant CD3 delta/epsilon/gamma and TCR zeta chains. T cell activation by antigen p...
    • TCR signaling in naive CD4+ T cells, organism-specific biosystem (from Pathway Interaction Database)
      TCR signaling in naive CD4+ T cells, organism-specific biosystem
      TCR signaling in naive CD4+ T cells
    • TCR signaling in naive CD8+ T cells, organism-specific biosystem (from Pathway Interaction Database)
      TCR signaling in naive CD8+ T cells, organism-specific biosystem
      TCR signaling in naive CD8+ T cells

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    non-membrane spanning protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    proline-rich region binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein C-terminus binding TAS
    Traceable Author Statement
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein tyrosine kinase activity TAS
    Traceable Author Statement
    more info
     
    protein tyrosine phosphatase activity TAS
    Traceable Author Statement
    more info
     
    Process Evidence Code Pubs
    T cell costimulation TAS
    Traceable Author Statement
    more info
     
    T cell receptor signaling pathway TAS
    Traceable Author Statement
    more info
     
    blood coagulation TAS
    Traceable Author Statement
    more info
     
    epidermal growth factor receptor signaling pathway TAS
    Traceable Author Statement
    more info
     
    negative regulation of cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    peptidyl-tyrosine dephosphorylation TAS
    Traceable Author Statement
    more info
     
    platelet activation TAS
    Traceable Author Statement
    more info
     
    protein phosphorylation TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    centrosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm TAS
    Traceable Author Statement
    more info
    PubMed 
    cytosol TAS
    Traceable Author Statement
    more info
     
    intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    plasma membrane TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    tyrosine-protein kinase CSK
    Names
    tyrosine-protein kinase CSK
    C-Src kinase
    protein-tyrosine kinase CYL
    NP_001120662.1
    NP_004374.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127190.1NP_001120662.1  tyrosine-protein kinase CSK

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC091230, AK290531, AW575209, AY007162
      Consensus CDS
      CCDS10269.1
      UniProtKB/TrEMBL
      A8K3B6
      UniProtKB/TrEMBL
      B2R6Q4
      UniProtKB/Swiss-Prot
      P41240
      Related
      ENSP00000414764, OTTHUMP00000249803, ENST00000439220, OTTHUMT00000421491
      Conserved Domains (4) summary
      cd00174
      Location:1467
      Blast Score: 150
      SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of ...
      cd05082
      Location:188443
      Blast Score: 1408
      PTKc_Csk; Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase
      smart00221
      Location:195440
      Blast Score: 941
      STYKc; Protein kinase; unclassified specificity.
      cd09937
      Location:78175
      Blast Score: 558
      SH2_csk_like; Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)
    2. NM_004383.2NP_004374.1  tyrosine-protein kinase CSK

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AW575209, BC106073
      Consensus CDS
      CCDS10269.1
      UniProtKB/TrEMBL
      B2R6Q4
      UniProtKB/Swiss-Prot
      P41240
      Related
      ENSP00000220003, OTTHUMP00000183471, ENST00000220003, OTTHUMT00000286398
      Conserved Domains (4) summary
      cd00174
      Location:1467
      Blast Score: 150
      SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of ...
      cd05082
      Location:188443
      Blast Score: 1408
      PTKc_Csk; Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase
      smart00221
      Location:195440
      Blast Score: 941
      STYKc; Protein kinase; unclassified specificity.
      cd09937
      Location:78175
      Blast Score: 558
      SH2_csk_like; Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000015.9 Reference GRCh37.p5 Primary Assembly

      Range
      75074425..75095539
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000147.1 Alternate HuRef

      Range
      51872089..51892744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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