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Fau Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [ Mus musculus (house mouse) ]

Gene ID: 14109, updated on 8-May-2016
Official Symbol
Fauprovided by MGI
Official Full Name
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)provided by MGI
Primary source
MGI:MGI:102547
See related
Ensembl:ENSMUSG00000038274
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MNSFbeta
Orthologs
Location:
19 A; 19 4.34 cM
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (6057888..6059524)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (6057888..6059524)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene synovial apoptosis inhibitor 1, synoviolin Neighboring gene microRNA 6988 Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene zinc finger, HIT domain containing 2 Neighboring gene transmembrane 7 superfamily member 2 Neighboring gene VPS51 GARP complex subunit

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
antibacterial humoral response ISO
Inferred from Sequence Orthology
more info
 
defense response to Gram-positive bacterium ISO
Inferred from Sequence Orthology
more info
 
innate immune response in mucosa ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
extracellular space ISO
Inferred from Sequence Orthology
more info
 
small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
40S ribosomal protein S30
Names
MNSF-beta
monoclonal non-specific suppressor factor beta
monoclonal nonspecific suppressor factor beta
monoclonal nonspecific suppressor factor betamonoclonal nonspecific suppressor factor beta
ubiquitin-like protein FUBI

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001160239.2NP_001153711.1  40S ribosomal protein S30 precursor

    See identical proteins and their annotated locations for NP_001153711.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 3. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC131692, AK132752, BY032057
    Consensus CDS
    CCDS29489.1
    UniProtKB/Swiss-Prot
    P35545
    UniProtKB/TrEMBL
    Q642K5
    Related
    ENSMUSP00000136803, ENSMUST00000178310
    Conserved Domains (3) summary
    cd01793
    Location:174
    Fubi; Fubi ubiquitin-like protein
    smart00213
    Location:170
    UBQ; Ubiquitin homologues
    pfam04758
    Location:75133
    Ribosomal_S30; Ribosomal protein S30
  2. NM_001190436.1NP_001177365.1  40S ribosomal protein S30 precursor

    See identical proteins and their annotated locations for NP_001177365.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) represents the longest transcript. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC131692, AK008466
    Consensus CDS
    CCDS29489.1
    UniProtKB/Swiss-Prot
    P35545
    UniProtKB/TrEMBL
    Q642K5
    Related
    ENSMUSP00000136358, ENSMUST00000179142
    Conserved Domains (3) summary
    cd01793
    Location:174
    Fubi; Fubi ubiquitin-like protein
    smart00213
    Location:170
    UBQ; Ubiquitin homologues
    pfam04758
    Location:75133
    Ribosomal_S30; Ribosomal protein S30
  3. NM_007990.3NP_032016.1  40S ribosomal protein S30 precursor

    See identical proteins and their annotated locations for NP_032016.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) differs in the 5' UTR, compared to variant 3. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC131692, AK002355, BY032057
    Consensus CDS
    CCDS29489.1
    UniProtKB/Swiss-Prot
    P35545
    UniProtKB/TrEMBL
    Q642K5
    Related
    ENSMUSP00000042835, ENSMUST00000043074
    Conserved Domains (3) summary
    cd01793
    Location:174
    Fubi; Fubi ubiquitin-like protein
    smart00213
    Location:170
    UBQ; Ubiquitin homologues
    pfam04758
    Location:75133
    Ribosomal_S30; Ribosomal protein S30

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

    Range
    6057888..6059524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000041.1 Alternate Mm_Celera

    Range
    5928748..5930387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)