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CBLN4 cerebellin 4 precursor [ Homo sapiens (human) ]

Gene ID: 140689, updated on 26-May-2016
Official Symbol
CBLN4provided by HGNC
Official Full Name
cerebellin 4 precursorprovided by HGNC
Primary source
HGNC:HGNC:16231
See related
Ensembl:ENSG00000054803 HPRD:16685; MIM:615029; Vega:OTTHUMG00000032782
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CBLNL1
Summary
This gene encodes a member of a family of small secreted proteins containing C1Q domains. Members of this family are involved in regulation of neurexin signalling during synapse development. The mouse homolog of the protein encoded by this gene competes with netrin to bind to the deleted in colorectal cancer receptor. [provided by RefSeq, Aug 2012]
Orthologs
Location:
20q13
Exon count:
4
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 20 NC_000020.11 (55997357..56005474, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (54572413..54580528, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372677 Neighboring gene uncharacterized LOC105372678 Neighboring gene uncharacterized LOC105372679 Neighboring gene uncharacterized LOC105376989

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
protein secretion IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell IEA
Inferred from Electronic Annotation
more info
 
cell junction IEA
Inferred from Electronic Annotation
more info
 
extracellular space IEA
Inferred from Electronic Annotation
more info
 
synapse IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
cerebellin-4
Names
cerebellin precursor-like 1
cerebellin-like glycoprotein 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080617.5NP_542184.1  cerebellin-4 precursor

    See identical proteins and their annotated locations for NP_542184.1

    Status: REVIEWED

    Source sequence(s)
    AK289640, AY358527, DA137489, DA391781
    Consensus CDS
    CCDS13448.1
    UniProtKB/Swiss-Prot
    Q9NTU7
    Related
    ENSP00000064571, OTTHUMP00000031325, ENST00000064571, OTTHUMT00000079783
    Conserved Domains (1) summary
    cl00147
    Location:70201
    TNF; Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal ...

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p2 Primary Assembly

    Range
    55997357..56005474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006723704.2XP_006723767.1  

Alternate CHM1_1.1

Genomic

  1. NC_018931.2 Alternate CHM1_1.1

    Range
    54473476..54481591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)