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RPS4Y2 ribosomal protein S4, Y-linked 2 [ Homo sapiens (human) ]

Gene ID: 140032, updated on 8-May-2016
Official Symbol
RPS4Y2provided by HGNC
Official Full Name
ribosomal protein S4, Y-linked 2provided by HGNC
Primary source
HGNC:HGNC:18501
See related
Ensembl:ENSG00000280969 HPRD:15960; MIM:400030; Vega:OTTHUMG00000036540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS4Y2P
Summary
The protein encoded by this gene is a ribosomal protein that is highly similar to RPS4Y1. This gene is located in the male-specific region of the Y chromosome. [provided by RefSeq, Aug 2012]
Orthologs
Location:
Yq11.223
Exon count:
8
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) Y NC_000024.10 (20756068..20781056)
105 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (22917954..22942918)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 8, member A1 pseudogene Neighboring gene transducin (beta)-like 1, Y-linked pseudogene 1 Neighboring gene heat shock transcription factor, Y-linked 4, pseudogene Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene 17

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
rRNA binding IEA
Inferred from Electronic Annotation
more info
 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
translation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
40S ribosomal protein S4, Y isoform 2
Names
40S ribosomal protein S4, Y
ribosomal protein S4, Y-linked 2 pseudogene

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032924.1 RefSeqGene

    Range
    5001..29965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001039567.2NP_001034656.1  40S ribosomal protein S4, Y isoform 2

    See identical proteins and their annotated locations for NP_001034656.1

    Status: REVIEWED

    Source sequence(s)
    AF497481
    Consensus CDS
    CCDS44028.1
    UniProtKB/Swiss-Prot
    Q8TD47
    Related
    ENSP00000486252, OTTHUMP00000034699, ENST00000629237, OTTHUMT00000088873
    Conserved Domains (4) summary
    PLN00036
    Location:1260
    PLN00036; 40S ribosomal protein S4; Provisional
    pfam00900
    Location:94170
    Ribosomal_S4e; Ribosomal family S4e
    cd06087
    Location:175229
    KOW_RPS4; KOW motif of Ribosomal Protein S4 (RPS4)
    pfam08071
    Location:340
    RS4NT; RS4NT (NUC023) domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p2 Primary Assembly

    Range
    20756068..20781056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011531423.1XP_011529725.1  

    Conserved Domains (3) summary
    PRK04313
    Location:7222
    PRK04313; 30S ribosomal protein S4e; Validated
    pfam00900
    Location:77153
    Ribosomal_S4e; Ribosomal family S4e
    cd06087
    Location:158212
    KOW_RPS4; KOW motif of Ribosomal Protein S4 (RPS4)