These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_029065.1 RefSeqGene
- Range
- 4969..91086
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001267562.1 → NP_001254491.1 cAMP-responsive element modulator isoform 23
Status: REVIEWED
- Description
- Transcript Variant: This variant (23) has an alternate first exon, lacks the exon containing the translation start codon, and uses an alternate splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (23) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AL117336, AY292864, BC041810, BG573680, BI459432, DA756152
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:118 – 174
Blast Score: 135
- bZIP_1; bZIP transcription factor
-
NM_001267563.1 → NP_001254492.1 cAMP-responsive element modulator isoform 24
Status: REVIEWED
- Description
- Transcript Variant: This variant (24) has an alternate first exon and lacks three other exons compared to variant 1. The resulting isoform (24) is shorter at the N-terminus and lacks an alternate internal segment compared to isoform 1.
- Source sequence(s)
-
AL117336, AL157783, BC041810, CB996061, DA756152
- Conserved Domains (1) summary
-
- pfam00170
Location:55 – 111
Blast Score: 111
- bZIP_1; bZIP transcription factor
-
NM_001267564.1 → NP_001254493.1 cAMP-responsive element modulator isoform 25
Status: REVIEWED
- Description
- Transcript Variant: This variant (25) uses an alternate first exon in place of the first three exons and contains an alternate in-frame exon compared to variant 1. The resulting isoform (25) has a shorter and distinct N-terminus and contains an alternate internal segment compared to isoform 1.
- Source sequence(s)
-
AL117336, AY292864, BC041810, BU193626, CD358637
- Consensus CDS
-
CCDS58074.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (2) summary
-
- pfam02173
Location:39 – 75
Blast Score: 165
- pKID; pKID domain
- pfam00170
Location:221 – 277
Blast Score: 125
- bZIP_1; bZIP transcription factor
-
NM_001267565.1 → NP_001254494.1 cAMP-responsive element modulator isoform 26
Status: REVIEWED
- Description
- Transcript Variant: This variant (26) lacks several exons and its transcription extends past a splice site that is used in variant 1, resulting in a novel 3' coding region and 3' UTR compared to variant 1. The resulting isoform (26) has distinct N- and C-termini compared to isoform 1.
- Source sequence(s)
-
BU193626, BU570307, CK300763
- Conserved Domains (2) summary
-
- pfam02173
Location:66 – 83
Blast Score: 74
- pKID; pKID domain
- pfam13900
Location:29 – 67
Blast Score: 188
- GVQW; Putative binding domain
-
NM_001267566.1 → NP_001254495.1 cAMP-responsive element modulator isoform 27
Status: REVIEWED
- Description
- Transcript Variant: This variant (27) lacks several exons and its transcription extends past a splice site that is used in variant 1, resulting in a novel 3' coding region and 3' UTR compared to variant 1. The resulting isoform (27) has distinct N- and C-termini compared to isoform 1.
- Source sequence(s)
-
BP370901, BU570307, CK300763
- Conserved Domains (1) summary
-
- pfam02173
Location:14 – 50
Blast Score: 152
- pKID; pKID domain
-
NM_001267567.1 → NP_001254496.1 cAMP-responsive element modulator isoform 28
Status: REVIEWED
- Description
- Transcript Variant: This variant (28) has an alternate first exon in place of the first five exons compared to variant 1. The resulting isoform (28) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AL117336, BC041810, BG720999, BP370901
- Consensus CDS
-
CCDS58075.1
- UniProtKB/TrEMBL
-
C9J785
- Conserved Domains (1) summary
-
- pfam00170
Location:77 – 133
Blast Score: 122
- bZIP_1; bZIP transcription factor
-
NM_001267568.1 → NP_001254497.1 cAMP-responsive element modulator isoform 29
Status: REVIEWED
- Description
- Transcript Variant: This variant (29) has an alternate exon in place of the first six exons and has an alternate last exon compared to variant 1. The resulting isoform (29) has shorter and distinct N- and C-termini compared to isoform 1.
- Source sequence(s)
-
AL117336, AW439476, CD639591, CD640977, D14826
-
NM_001267569.1 → NP_001254498.1 cAMP-responsive element modulator isoform 30
Status: REVIEWED
- Description
- Transcript Variant: This variant (30) has two alternate exons in place of the first six exons and has an alternate last exon compared to variant 1. The resulting isoform (30) has shorter and distinct N- and C-termini compared to isoform 1.
- Source sequence(s)
-
AL117336, AW439476, CD640977, D14826
-
NM_001267570.1 → NP_001254499.1 cAMP-responsive element modulator isoform 31
Status: REVIEWED
- Description
- Transcript Variant: This variant (31) has two alternate exons in place of the first six exons compared to variant 1. The resulting isoform (31) has a shorter and distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AK289379, AL117336, BC041810, CD640465
- Consensus CDS
-
CCDS58076.1
- UniProtKB/TrEMBL
-
C9JZ10
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:64 – 120
Blast Score: 98
- bZIP_1; bZIP transcription factor
-
NM_001881.3 → NP_001872.3 cAMP-responsive element modulator isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. These differences cause translation initiation at a downstream ATG, and result in a shorter isoform (2, also known as b) with a shorter N-terminus and a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC017117, BC066342, DA756152
- Consensus CDS
-
CCDS7184.1
- UniProtKB/Swiss-Prot
-
Q03060
- Related
- ENSP00000363858, OTTHUMP00000019443, ENST00000374726, OTTHUMT00000047551
- Conserved Domains (1) summary
-
- pfam02173
Location:53 – 89
Blast Score: 156
- pKID; pKID domain
-
NM_181571.2 → NP_853549.1 cAMP-responsive element modulator isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1). This isoform represents an activator tau2 isoform.
- Source sequence(s)
-
AL117336, AL157783, BC041810, BI561543
- Consensus CDS
-
CCDS7180.1
- UniProtKB/Swiss-Prot
-
Q03060
- Related
- ENSP00000265372, OTTHUMP00000216727, ENST00000345491, OTTHUMT00000357708
- Conserved Domains (2) summary
-
- pfam02173
Location:69 – 105
Blast Score: 165
- pKID; pKID domain
- pfam00170
Location:239 – 295
Blast Score: 122
- bZIP_1; bZIP transcription factor
-
NM_182717.1 → NP_874386.1 cAMP-responsive element modulator isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4), also known as ICER1 and hCREM 2alpha-a, uses an alternative downstream promoter, and differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. This results in a shorter isoform (4, also known as d) with distinct N- and C-termini, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AL117336, AL157783, BC041810, D14825, D14826
- Consensus CDS
-
CCDS7187.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:60 – 116
Blast Score: 106
- bZIP_1; bZIP transcription factor
-
NM_182718.1 → NP_874387.1 cAMP-responsive element modulator isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), also known as ICER11 gamma and hCREM 2beta-b, uses an alternative downstream promoter, and differs in the 5' UTR and 5' coding region, compared to variant 1. This results in a shorter isoform (5, also known as e) with a distinct N-terminus, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AL117336, BC041810, CN367927, D14826
- Consensus CDS
-
CCDS53519.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:48 – 104
Blast Score: 107
- bZIP_1; bZIP transcription factor
-
NM_182719.1 → NP_874388.1 cAMP-responsive element modulator isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), also known as ICER11 and hCREM 2beta-a, uses an alternative downstream promoter, and differs in the 5' UTR and 5' coding region, compared to variant 1. This results in a shorter isoform (6, also known as f) with a distinct N-terminus, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AL117336, AL157783, BC041810, D14825, D14826
- Consensus CDS
-
CCDS53517.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:60 – 116
Blast Score: 106
- bZIP_1; bZIP transcription factor
-
NM_182720.1 → NP_874389.1 cAMP-responsive element modulator isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), also known as ICER1 gamma and hCREM 2alpha-b, uses an alternative downstream promoter, and differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. This results in a shorter isoform (7, also known as g) with distinct N- and C-termini, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AL117336, BC041810, CN367927, D14826
- Consensus CDS
-
CCDS53518.1
- UniProtKB/Swiss-Prot
-
Q03060
- Related
- ENSP00000349387, OTTHUMP00000216746, ENST00000356917, OTTHUMT00000357740
- Conserved Domains (1) summary
-
- pfam00170
Location:48 – 104
Blast Score: 106
- bZIP_1; bZIP transcription factor
-
NM_182721.1 → NP_874390.1 cAMP-responsive element modulator isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses an alternative downstream promoter, and differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. This results in a shorter isoform (8, also known as h) with distinct N- and C-termini, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AK289379, AL117336, BC041810
- Consensus CDS
-
CCDS7188.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:52 – 108
Blast Score: 97
- bZIP_1; bZIP transcription factor
-
NM_182723.1 → NP_874392.1 cAMP-responsive element modulator isoform 10
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) uses an alternative downstream promoter, and differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. This results in a shorter isoform (10, also known as j) with distinct N- and C-termini, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AL117336, BC041810, CD686814
- Consensus CDS
-
CCDS53521.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:42 – 98
Blast Score: 99
- bZIP_1; bZIP transcription factor
-
NM_182724.1 → NP_874393.1 cAMP-responsive element modulator isoform 11
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) uses an alternative downstream promoter, and differs in the 5' UTR and 5' coding region, compared to variant 1. This results in a shorter isoform (11, also known as k) with a distinct N-terminus, compared to isoform 1. This isoform represents one of the early repressor ICER isoforms.
- Source sequence(s)
-
AK289379, AL117336, BC041810
- Consensus CDS
-
CCDS53520.1
- UniProtKB/TrEMBL
-
E9PAR4
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (1) summary
-
- pfam00170
Location:52 – 108
Blast Score: 98
- bZIP_1; bZIP transcription factor
-
NM_182769.2 → NP_877570.1 cAMP-responsive element modulator isoform 13
Status: REVIEWED
- Description
- Transcript Variant: This variant (13), also known as CREM theta2-tau2-beta, uses an alternative downstream promoter, and differs in the 5' UTR and 5' coding region, compared to variant 1. This results in a shorter isoform (13, also known as m) with a distinct N-terminus, compared to isoform 1. This isoform represents an activator isoform theta 2.
- Source sequence(s)
-
AL117336, AY292864, BC041810, BG719264, BP370901
- Consensus CDS
-
CCDS7186.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (2) summary
-
- pfam02173
Location:14 – 50
Blast Score: 165
- pKID; pKID domain
- pfam00170
Location:184 – 240
Blast Score: 127
- bZIP_1; bZIP transcription factor
-
NM_182770.2 → NP_877571.1 cAMP-responsive element modulator isoform 14
Status: REVIEWED
- Description
- Transcript Variant: This variant (14), also known as CREM theta2-beta, uses an alternative downstream promoter, differs in the 5' UTR and has multiple coding region differences, compared to variant 1. This results in a shorter isoform (14, also known as n) with a distinct N-terminus, compared to isoform 1. This isoform represents a repressor isoform theta 2.
- Source sequence(s)
-
AL117336, AY292864, BC041810, BG719264, BP370901
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (2) summary
-
- pfam02173
Location:14 – 50
Blast Score: 157
- pKID; pKID domain
- pfam00170
Location:121 – 177
Blast Score: 110
- bZIP_1; bZIP transcription factor
-
NM_182771.1 → NP_877572.1 cAMP-responsive element modulator isoform 15
Status: REVIEWED
- Description
- Transcript Variant: This variant (15), also known as CREM theta1-tau2-beta, uses an alternative downstream promoter, and differs in the 5' UTR and 5' coding region, compared to variant 1. This results in a shorter isoform (15, also known as o) with a distinct N-terminus, compared to isoform 1. This isoform represents an activator isoform theta 1.
- Source sequence(s)
-
AL117336, AY292864, BC041810, BG719264
- Consensus CDS
-
CCDS7185.1
- UniProtKB/Swiss-Prot
-
Q03060
- Related
- ENSP00000354593, OTTHUMP00000019448, ENST00000361599, OTTHUMT00000047558
- Conserved Domains (2) summary
-
- pfam02173
Location:39 – 75
Blast Score: 165
- pKID; pKID domain
- pfam00170
Location:209 – 265
Blast Score: 126
- bZIP_1; bZIP transcription factor
-
NM_182772.1 → NP_877573.1 cAMP-responsive element modulator isoform 16
Status: REVIEWED
- Description
- Transcript Variant: This variant (16), also known as CREM theta1-beta, uses an alternative downstream promoter, differs in the 5' UTR and has multiple coding region differences, compared to variant 1. This results in a shorter isoform (16, also known as p) with a distinct N-terminus, compared to isoform 1. This isoform represents a repressor isoform theta 1.
- Source sequence(s)
-
AL117336, AY292864, BC041810, BG719264
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (2) summary
-
- pfam02173
Location:39 – 75
Blast Score: 158
- pKID; pKID domain
- pfam00170
Location:146 – 202
Blast Score: 111
- bZIP_1; bZIP transcription factor
-
NM_183011.1 → NP_898829.1 cAMP-responsive element modulator isoform 21
Status: REVIEWED
- Description
- Transcript Variant: This variant (21), also known as CREM 10, differs in the 5' UTR, 3' UTR, and contains an additional segment in the coding region, compared to variant 1. This results in a shorter isoform (21, also known as u) with a distinct C-terminus, compared to isoform 1. This isoform represents the tau2 activator isoform.
- Source sequence(s)
-
AL117336, AL157783, BC041810, D14825
- Consensus CDS
-
CCDS7181.1
- UniProtKB/TrEMBL
-
E9PHM1
- UniProtKB/Swiss-Prot
-
Q03060
- Related
- ENSP00000333055, ENST00000333809
- Conserved Domains (2) summary
-
- pfam02173
Location:69 – 105
Blast Score: 167
- pKID; pKID domain
- pfam00170
Location:239 – 295
Blast Score: 124
- bZIP_1; bZIP transcription factor
-
NM_183012.1 → NP_898830.1 cAMP-responsive element modulator isoform 20
Status: REVIEWED
- Description
- Transcript Variant: This variant (20), also known as CREM 22, differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. This results in a shorter isoform (20, also known as t) with a distinct C-terminus, compared to isoform 1. This isoform represents the type alpha repressor isoform.
- Source sequence(s)
-
AL117336, AL157783, BC041810, D14825
- Consensus CDS
-
CCDS31181.1
- UniProtKB/TrEMBL
-
A8MPQ2
- UniProtKB/Swiss-Prot
-
Q03060
- Related
- ENSP00000409220, ENST00000439705
- Conserved Domains (2) summary
-
- pfam02173
Location:69 – 105
Blast Score: 162
- pKID; pKID domain
- pfam00170
Location:176 – 232
Blast Score: 109
- bZIP_1; bZIP transcription factor
-
NM_183013.2 → NP_898831.1 cAMP-responsive element modulator isoform 19
Status: REVIEWED
- Description
- Transcript Variant: This variant (19), also known as hCREM type1 alpha, differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. This results in a shorter isoform (19, also known as s) with a distinct C-terminus, compared to isoform 1. This isoform represents the type alpha repressor isoform.
- Source sequence(s)
-
AL117336, AL157783, BC041810, D14825, DA756152
- Consensus CDS
-
CCDS7182.1
- UniProtKB/Swiss-Prot
-
Q03060
- Conserved Domains (2) summary
-
- pfam02173
Location:69 – 105
Blast Score: 162
- pKID; pKID domain
- pfam00170
Location:188 – 244
Blast Score: 108
- bZIP_1; bZIP transcription factor
-
NM_183060.2 → NP_898883.1 cAMP-responsive element modulator isoform 22
Status: REVIEWED
- Description
- Transcript Variant: This variant (22) differs in the 5' UTR and lacks an in-frame segment of the coding region, compared to variant 1. This variant uses a downstream start codon, compared to variant 1. The resulting isoform (22, also known as v) is shorter and has a shorter N-terminus, compared to isoform 1. This isoform represents the type alpha repressor isoform.
- Source sequence(s)
-
AL117336, AL157783, AV707433, BC041810, BI561543
- Consensus CDS
-
CCDS7183.1
- UniProtKB/TrEMBL
-
Q5W1A7
- Related
- ENSP00000363860, ENST00000374728
- Conserved Domains (2) summary
-
- pfam02173
Location:53 – 89
Blast Score: 159
- pKID; pKID domain
- pfam00170
Location:160 – 216
Blast Score: 113
- bZIP_1; bZIP transcription factor
RNA
-
NR_051971.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) has an alternate first exon in place of the first 6 exons and uses an alternate splice junction at the 5' end of the last exon compared to variant 1. This variant is represented as non-coding because the predicted protein is shorter than 100 aa and there is no support for the existence of this protein.
- Source sequence(s)
-
AK289379, AL117336, BC041810, CD686814
-
NR_051972.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) has an alternate first exon in place of the first 6 exons compared to variant 1. This variant is represented as non-coding because the predicted protein is shorter than 100 aa and there is no support for the existence of this protein.
- Source sequence(s)
-
AL117336, BC041810, CD686814, DT220562
-
NR_051973.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (17) has an alternate first exon in place of the first 6 exons compared to variant 1. This variant is represented as non-coding because the predicted protein is shorter than 100 aa and there is no support for the existence of this protein.
- Source sequence(s)
-
AA453346, AL117336, AL157783, BC041810, DA756152
-
NR_051974.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (18) has an alternate first exon in place of the first two exons and lacks two other exons compared to variant 1. This variant is represented as non-coding because the predicted protein is shorter than 100 aa and there is no support for the existence of this protein.
- Source sequence(s)
-
AL117336, AL157783, BC041810, CN367927, DA756152
-
NR_051975.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (32) has an alternate first exon in place of the first two exons and lacks three other exons compared to variant 1. This variant is represented as non-coding because the predicted protein is shorter than 100 aa and there is no support for the existence of this protein.
- Source sequence(s)
-
AL117336, AL157783, BC041810, DA756152, DR760671
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p10 Primary Assembly
Genomic
-
NC_000010.10 Reference GRCh37.p10 Primary Assembly
- Range
- 35415769..35501886
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000142.1 Alternate HuRef
- Range
- 35134234..35220214
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CHM1_1.0
Genomic
-
NC_018921.1 Alternate CHM1_1.0
- Range
- 35315717..35401783
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the cited
reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links,
or BLAST links (BLink), but may still be retrieved by clicking on their
accession.version below.
-
NM_182722.1: Suppressed sequence
- Description
- NM_182722.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
-
NM_182725.1: Suppressed sequence
- Description
- NM_182725.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
-
NM_182850.2: Suppressed sequence
- Description
- NM_182850.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
-
NM_182853.2: Suppressed sequence
- Description
- NM_182853.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.