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TMEM71 transmembrane protein 71 [ Homo sapiens (human) ]

Gene ID: 137835, updated on 13-Jan-2015
Official Symbol
TMEM71provided by HGNC
Official Full Name
transmembrane protein 71provided by HGNC
Primary source
HGNC:HGNC:26572
See related
Ensembl:ENSG00000165071; HPRD:08154; Vega:OTTHUMG00000164647
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
See TMEM71 in MapViewer
Location:
8q24.22
Exon count:
11
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 8 NC_000008.11 (132709945..132760668, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (133722191..133772914, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene Helicobacter pylori responsive 1 (non-protein coding) Neighboring gene leucine rich repeat containing 6 Neighboring gene uncharacterized LOC102723614 Neighboring gene PHD finger protein 20-like 1 Neighboring gene thyroglobulin Neighboring gene ribosomal protein L21 pseudogene 78

Markers

Homology

Clone Names

  • FLJ33069, MGC111188

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
transmembrane protein 71
Names
transmembrane protein 71

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145153.1NP_001138625.1  transmembrane protein 71 isoform 2

    See proteins identical to NP_001138625.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region and lacks a coding exon compared to variant 1. The encoded isoform (2) is shorter but has the same N- and C-termini compared to isoform 1.
    Source sequence(s)
    BC062592, BC105783, BG505962
    Consensus CDS
    CCDS47921.1
    UniProtKB/Swiss-Prot
    Q6P5X7
    Related
    ENSP00000367133, OTTHUMP00000227150, ENST00000377901, OTTHUMT00000379592
    Conserved Domains (1) summary
    pfam15121
    Location:1153
    TMEM71; TMEM71 protein family
  2. NM_144649.2NP_653250.2  transmembrane protein 71 isoform 1

    See proteins identical to NP_653250.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    BC062592, BG505962
    Consensus CDS
    CCDS6366.1
    UniProtKB/Swiss-Prot
    Q6P5X7
    Related
    ENSP00000349296, OTTHUMP00000227149, ENST00000356838, OTTHUMT00000379591
    Conserved Domains (1) summary
    pfam15121
    Location:1134
    TMEM71; TMEM71 protein family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000008.11 

    Range
    132709945..132760668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006716507.1XP_006716570.1  

    Conserved Domains (1) summary
    pfam15121
    Location:9148
    TMEM71; TMEM71 protein family
  2. XM_005250795.2XP_005250852.1  

    Conserved Domains (1) summary
    pfam15121
    Location:1153
    TMEM71; TMEM71 protein family
  3. XM_005250794.2XP_005250851.1  

    See proteins identical to XP_005250851.1

    UniProtKB/Swiss-Prot
    Q6P5X7
    Related
    ENSP00000428228, OTTHUMP00000227148, ENST00000523829, OTTHUMT00000379590
    Conserved Domains (1) summary
    pfam15121
    Location:1153
    TMEM71; TMEM71 protein family
  4. XM_006716508.1XP_006716571.1  

Alternate CHM1_1.1

Genomic

  1. NC_018919.2 

    Range
    133762980..133813571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate HuRef

Genomic

  1. AC_000140.1 

    Range
    129040662..129091279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)